Annotations: 2WY2

NMR structure of the IIAchitobiose-IIBchitobiose phosphoryl transition state complex of the N,N'-diacetylchitoboise brance of the E. coli phosphotransferase system.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	PTS system IIB component-like	8044343	3000300	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078911	3001316	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078911	3001316	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078911	3001316	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	adh_short	e2wy2D1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (v294.1)
C	adh_short	e2wy2C1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (v294.1)
B	adh_short	e2wy2B1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (v294.1)
A	adh_short	e2wy2A1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: adh_short	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (4.3.0)
C	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
B	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
A	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
D	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit (PTS_IIB)	PTS system, Lactose/Cellobiose specific IIB subunit	The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally ...	The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIB PTS system cytoplasmic enzymes. The fold of IIB cellobiose shows similar structure to mammalian tyrosine phosphatases. This family also contains the fructose specific IIB subunit.	Domain
A, B, C	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit (PTS_IIA)	PTS system, Lactose/Cellobiose specific IIA subunit	The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structural ...	The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIA PTS system enzymes. This family of proteins normally function as a homotrimer, stabilised by a centrally located metal ion [1]. Separation into subunits is thought to occur after phosphorylation.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D	N\,N'-DIACETYLCHITOBIOSE-SPECIFIC PHOSPHOTRANSFERASE ENZYME IIB COMPONENT	protein-phosphocysteine-N,N'-diacetylchitobiose phosphotransferase system transporter activity active transmembrane transporter activity protein-phosphocysteine-sugar phosphotransferase activity transporter activity transferase activity carbohydrate transmembrane transporter activity transmembrane transporter activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups kinase activity protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity	localization N,N'-diacetylchitobiose import transport carbohydrate derivative transport establishment of localization import into cell phosphoenolpyruvate-dependent sugar phosphotransferase system import across plasma membrane carbohydrate import across plasma membrane carbohydrate transport transmembrane transport cellular process carbohydrate transmembrane transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex transmembrane transporter complex membrane membrane protein complex transporter complex
A, B, C	N\,N'-DIACETYLCHITOBIOSE-SPECIFIC PHOSPHOTRANSFERASE ENZYME IIA COMPONENT	protein-phosphocysteine-N,N'-diacetylchitobiose phosphotransferase system transporter activity active transmembrane transporter activity protein-phosphocysteine-sugar phosphotransferase activity transporter activity transferase activity carbohydrate transmembrane transporter activity transmembrane transporter activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups	localization N,N'-diacetylchitobiose import transport carbohydrate derivative transport establishment of localization import into cell phosphoenolpyruvate-dependent sugar phosphotransferase system import across plasma membrane carbohydrate import across plasma membrane carbohydrate transport transmembrane transport cellular process carbohydrate transmembrane transport	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex transmembrane transporter complex membrane membrane protein complex transporter complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D	IPR051819	PTS system sugar-specific EIIB domain-containing protein	Family
D	IPR003501	Phosphotransferase system, EIIB component, type 2/3	Domain
D	IPR036095	PTS system IIB component-like superfamily	Homologous Superfamily
D	IPR013012	Phosphotransferase system, EIIB component, type 3	Domain
A, B, C	IPR036542	Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily	Homologous Superfamily
A, B, C	IPR003188	Phosphotransferase system, lactose/cellobiose-type IIA subunit	Family

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