2WVG
Structural insights into the pre-reaction state of pyruvate decarboxylase from Zymomonas mobilis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Thiamin diphosphate-binding fold (THDP-binding) | 8044268 | 3001790 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | DHS-like NAD/FAD-binding domain | 8044249 | 3001728 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Thiamin diphosphate-binding fold (THDP-binding) | 8044269 | 3001790 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Thiamin diphosphate-binding fold (THDP-binding) | 8044269 | 3001790 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | DHS-like NAD/FAD-binding domain | 8044249 | 3001728 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Thiamin diphosphate-binding fold (THDP-binding) | 8044268 | 3001790 | SCOP2B (2021-05-27) |
C [auth E] | SCOP2B Superfamily | Thiamin diphosphate-binding fold (THDP-binding) | 8044268 | 3001790 | SCOP2B (2021-05-27) |
C [auth E] | SCOP2B Superfamily | DHS-like NAD/FAD-binding domain | 8044249 | 3001728 | SCOP2B (2021-05-27) |
C [auth E] | SCOP2B Superfamily | Thiamin diphosphate-binding fold (THDP-binding) | 8044269 | 3001790 | SCOP2B (2021-05-27) |
D [auth F] | SCOP2B Superfamily | Thiamin diphosphate-binding fold (THDP-binding) | 8044268 | 3001790 | SCOP2B (2021-05-27) |
D [auth F] | SCOP2B Superfamily | Thiamin diphosphate-binding fold (THDP-binding) | 8044269 | 3001790 | SCOP2B (2021-05-27) |
D [auth F] | SCOP2B Superfamily | DHS-like NAD/FAD-binding domain | 8044249 | 3001728 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00205 | e2wvgA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: PF00205 | ECOD (1.6) |
A | PF02775 | e2wvgA3 | A: a/b three-layered sandwiches | X: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | H: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | T: Thiamin diphosphate-binding fold (THDP-binding) | F: PF02775 | ECOD (1.6) |
A | PF02776 | e2wvgA2 | A: a/b three-layered sandwiches | X: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | H: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | T: Thiamin diphosphate-binding fold (THDP-binding) | F: PF02776 | ECOD (1.6) |
B | PF00205 | e2wvgB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: PF00205 | ECOD (1.6) |
B | PF02775 | e2wvgB3 | A: a/b three-layered sandwiches | X: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | H: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | T: Thiamin diphosphate-binding fold (THDP-binding) | F: PF02775 | ECOD (1.6) |
B | PF02776 | e2wvgB2 | A: a/b three-layered sandwiches | X: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | H: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | T: Thiamin diphosphate-binding fold (THDP-binding) | F: PF02776 | ECOD (1.6) |
C [auth E] | PF00205 | e2wvgE1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: PF00205 | ECOD (1.6) |
C [auth E] | PF02775 | e2wvgE3 | A: a/b three-layered sandwiches | X: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | H: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | T: Thiamin diphosphate-binding fold (THDP-binding) | F: PF02775 | ECOD (1.6) |
C [auth E] | PF02776 | e2wvgE2 | A: a/b three-layered sandwiches | X: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | H: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | T: Thiamin diphosphate-binding fold (THDP-binding) | F: PF02776 | ECOD (1.6) |
D [auth F] | PF00205 | e2wvgF1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: PF00205 | ECOD (1.6) |
D [auth F] | PF02775 | e2wvgF3 | A: a/b three-layered sandwiches | X: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | H: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | T: Thiamin diphosphate-binding fold (THDP-binding) | F: PF02775 | ECOD (1.6) |
D [auth F] | PF02776 | e2wvgF2 | A: a/b three-layered sandwiches | X: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | H: Thiamin diphosphate-binding fold (THDP-binding) (From Topology) | T: Thiamin diphosphate-binding fold (THDP-binding) | F: PF02776 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.970 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | CATH (4.3.0) |
A | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
B | 3.40.50.970 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | CATH (4.3.0) |
B | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
C [auth E] | 3.40.50.970 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | CATH (4.3.0) |
C [auth E] | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
D [auth F] | 3.40.50.970 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | CATH (4.3.0) |
D [auth F] | 3.40.50.1220 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | TPP-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B, C [auth E], D [auth F] | PF00205 | Thiamine pyrophosphate enzyme, central domain (TPP_enzyme_M) | Thiamine pyrophosphate enzyme, central domain | The central domain of TPP enzymes contains a 2-fold Rossman fold. | Domain |
A, B, C [auth E], D [auth F] | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain (TPP_enzyme_C) | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | - | Domain |
A, B, C [auth E], D [auth F] | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain (TPP_enzyme_N) | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | - | Domain |