Improved Model of Plant Photosystem I
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| I [auth E] | SCOP2B Superfamily | Electron transport accessory proteins | 8074494 | 3000325 | SCOP2B (2022-06-29) |
| H [auth D] | SCOP2B Superfamily | Photosystem I subunit PsaD | 8074488 | 3000951 | SCOP2B (2022-06-29) |
| G [auth C] | SCOP2 Family | 7-Fe ferredoxin | 8074477 | 4001227 | SCOP2 (2022-06-29) |
| G [auth C] | SCOP2 Superfamily | 4Fe-4S ferredoxins | 8074478 | 3000020 | SCOP2 (2022-06-29) |
| F [auth B] | SCOP2 Family | Photosystem I subunits PsaA/PsaB | 8074469 | 4002118 | SCOP2 (2022-06-29) |
| F [auth B] | SCOP2 Superfamily | Photosystem I subunits PsaA/PsaB | 8074470 | 3000850 | SCOP2 (2022-06-29) |
| E [auth A] | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8074458 | 3000850 | SCOP2B (2022-06-29) |
| D [auth 4] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8077000 | 3000343 | SCOP2B (2022-06-29) |
| B [auth 2] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8076998 | 3000343 | SCOP2B (2022-06-29) |
| P [auth L] | SCOP2 Family | Photosystem I reaction center subunit XI, PsaL | 8087177 | 4002135 | SCOP2 (2022-06-29) |
| P [auth L] | SCOP2 Superfamily | Photosystem I reaction center subunit XI, PsaL | 8087178 | 3000870 | SCOP2 (2022-06-29) |
| N [auth J] | SCOP2B Superfamily | Subunit IX of photosystem I reaction centre, PsaJ | 8074516 | 3000824 | SCOP2B (2022-06-29) |
| L [auth H] | SCOP2 Family | Photosystem I reaction centre subunit VI | 8051251 | 4007266 | SCOP2 (2022-06-29) |
| L [auth H] | SCOP2 Superfamily | Photosystem I reaction centre subunit VI | 8102523 | 3002733 | SCOP2 (2022-06-29) |
| J [auth F] | SCOP2B Superfamily | Subunit III of photosystem I reaction centre, PsaF | 8074446 | 3000813 | SCOP2B (2022-06-29) |
| A [auth 1] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8076986 | 3000343 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth E] | e2wscE1 | A: Cystatin-like | X: NTF2-like | H: NTF2-like | T: PSI_PsaE | F: | ECOD (20:10:01) | |
| H [auth D] | e2wscD1 | A: Cystatin-like | X: NTF2-like | H: NTF2-like | T: PA_decarbox | F: | ECOD (20:10:01) | |
| G [auth C] | e2wscC1 | A: Cystatin-like | X: NTF2-like | H: NTF2-like | T: PSI_PsaE | F: | ECOD (20:10:01) | |
| F [auth B] | e2wscB1 | A: beta-propeller-like | X: beta-pinwheel | H: beta-pinwheel | T: Ldh_1_N | F: | ECOD (20:10:01) | |
| E [auth A] | e2wscA1 | A: beta-propeller-like | X: beta-pinwheel | H: beta-pinwheel | T: Ldh_1_N | F: | ECOD (20:10:01) | |
| D [auth 4] | e2wsc41 | A: OB-fold | X: Nucleic acid-binding protein | H: Nucleic acid-binding protein | T: Peptidase_M42 | F: | ECOD (20:10:01) | |
| C [auth 3] | e2wsc31 | A: OB-fold | X: Nucleic acid-binding protein | H: Nucleic acid-binding protein | T: Peptidase_M42 | F: | ECOD (20:10:01) | |
| B [auth 2] | e2wsc21 | A: Ntn/PP2C | X: Chlorophyll a-b binding protein | H: Chlorophyll a-b binding protein | T: Chloroa_b-bind | F: | ECOD (20:10:01) | |
| Q [auth N] | e2wscN1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: ATP-synt_ab_N | F: | ECOD (20:10:01) | |
| P [auth L] | e2wscL1 | A: Cystatin-like | X: NTF2-like | H: NTF2-like | T: PSI_PsaE | F: | ECOD (20:10:01) | |
| O [auth K] | e2wscK1 | A: OB-fold | X: Nucleic acid-binding protein | H: Nucleic acid-binding protein | T: Peptidase_M42 | F: | ECOD (20:10:01) | |
| N [auth J] | e2wscJ1 | A: Cystatin-like | X: NTF2-like | H: NTF2-like | T: MeaB | F: | ECOD (20:10:01) | |
| M [auth I] | e2wscI1 | A: Cystatin-like | X: NTF2-like | H: NTF2-like | T: PSI_PsaE | F: | ECOD (20:10:01) | |
| L [auth H] | e2wscH1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: ATP-synt_ab_N | F: | ECOD (20:10:01) | |
| K [auth G] | e2wscG1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: ATP-synt_ab_N | F: | ECOD (20:10:01) | |
| J [auth F] | e2wscF1 | A: Cystatin-like | X: NTF2-like | H: NTF2-like | T: PA_decarbox | F: | ECOD (20:10:01) | |
| A [auth 1] | e2wsc11 | A: OB-fold | X: Nucleic acid-binding protein | H: Nucleic acid-binding protein | T: Peptidase_M42 | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth E] | PF02427 | Photosystem I reaction centre subunit IV / PsaE (PSI_PsaE) | Photosystem I reaction centre subunit IV / PsaE | PsaE is a 69 amino acid polypeptide from photosystem I present on the stromal side of the thylakoid membrane [1]. The structure is comprised of a well-defined five-stranded beta-sheet similar to SH3 domains [1]. | Domain |
| H [auth D] | PF02531 | PsaD (PsaD) | PsaD | - | Family |
| P [auth L] | PF02605 | Photosystem I reaction centre subunit XI (PsaL) | Photosystem I reaction centre subunit XI | - | Family |
| N [auth J] | PF01701 | Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ) | Photosystem I reaction centre subunit IX / PsaJ | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Photosystems | Photosystem I (Plant) |














