2WPB
Crystal structure of the E192N mutant of E. Coli N-acetylneuraminic acid lyase in complex with pyruvate and the inhibitor (2R,3R)-2,3,4- trihydroxy-N,N-dipropylbutanamide in space group P21 crystal form I
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d2wpbb_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | Class I aldolase | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
C | d2wpbc_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | Class I aldolase | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
D | d2wpbd_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | Class I aldolase | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d2wpba1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | Class I aldolase | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d2wpba2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Aldolase | 8044525 | 3000445 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Aldolase | 8044525 | 3000445 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Aldolase | 8044525 | 3000445 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Aldolase | 8044525 | 3000445 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | DHDPS | e2wpbB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHDPS | ECOD (1.6) |
C | DHDPS | e2wpbC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHDPS | ECOD (1.6) |
D | DHDPS | e2wpbD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHDPS | ECOD (1.6) |
A | DHDPS | e2wpbA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHDPS | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
C | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
D | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
A | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005264 | N-acetylneuraminate lyase | Family | |
IPR020624 | Schiff base-forming aldolase, conserved site | Conserved Site | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR020625 | Schiff base-forming aldolase, active site | Active Site | |
IPR002220 | DapA-like | Family |