BtGH84 in complex with n-butyl pugnac
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2wcaa3 | All alpha proteins | Hyaluronidase domain-like | Hyaluronidase post-catalytic domain-like | Hyaluronidase post-catalytic domain-like | Glucosaminidase GH84 post-catalytic domain | (Bacteroides thetaiotaomicron VPI-5482 ) [TaxId: 226186 ], | SCOPe (2.08) |
| A | d2wcaa2 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | alpha-D-glucuronidase/Hyaluronidase catalytic domain | Glucosaminidase GH84, catalytic domain | (Bacteroides thetaiotaomicron VPI-5482 ) [TaxId: 226186 ], | SCOPe (2.08) |
| A | d2wcaa1 | Alpha and beta proteins (a+b) | Zincin-like | beta-N-acetylhexosaminidase-like domain | Hyaluronidase N-terminal domain-like | Glucosaminidase GH84, N-terminal domain | (Bacteroides thetaiotaomicron VPI-5482 ) [TaxId: 226186 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | (Trans)glycosidases | 8037813 | 3000313 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8037815 | 3000192 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Hyaluronidase post-catalytic domain-like | 8037810 | 3001475 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.30.379.10 | Alpha Beta | 2-Layer Sandwich | Chitobiase | domain 2 | CATH (4.3.0) |
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| A | 1.20.58.460 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF21809 | Bacterial GH84, post-catalytic domain (Glyco_hydro_84_hel) | Bacterial GH84, post-catalytic domain | This is a helical domain found after the catalytic domain of enzymes from the Glycoside hydrolase family 84 from Bacteroides spp. and certain pathogenic Clostridia spp [1-5]. | Domain | |
| PF18344 | Carbohydrate binding module family 32 (CBM32) | Carbohydrate binding module family 32 | This domain is found in GH84C present in Clostridium perfringens. GH84C is a beta-N-acetylglucosaminidase. This domain is a family 32 carbohydrate binding module (CBM) which preferentially recognizes the non-reducing terminus of N-acetyllactosamine [ ... | Domain | |
| PF07555 | beta-N-acetylglucosaminidase (NAGidase) | beta-N-acetylglucosaminidase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR051822 | Glycosyl Hydrolase Family 84 | Family | |
| IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
| IPR029018 | Beta-hexosaminidase-like, domain 2 | Homologous Superfamily | |
| IPR049478 | O-GlcNAcase BT_4395-like, post-catalytic domain | Domain | |
| IPR011496 | Beta-N-acetylglucosaminidase, catalytic domain | Domain | |
| IPR048162 | O-GlcNAcase BT_4395-like | Family | |
| IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
| IPR015882 | Beta-hexosaminidase, bacterial type, N-terminal | Domain |














