Annotations: 2VYX

Crystal structure of the T. thermophilus dodecin W38F mutant

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
L	d2vyxl_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
K	d2vyxk_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
J	d2vyxj_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
I	d2vyxi_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
H	d2vyxh_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
G	d2vyxg_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
F	d2vyxf_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
E	d2vyxe_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
D	d2vyxd_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
C	d2vyxc_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
B	d2vyxb_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
A	d2vyxa_	Alpha and beta proteins (a+b)	Dodecin subunit-like	Dodecin-like	Dodecin-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Dodecin-like	8033704	3000608	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	ATP-synt_ab_N	e2vyxL1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
K	ATP-synt_ab_N	e2vyxK1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
J	ATP-synt_ab_N	e2vyxJ1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
I	ATP-synt_ab_N	e2vyxI1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
H	ATP-synt_ab_N	e2vyxH1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
G	ATP-synt_ab_N	e2vyxG1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
F	ATP-synt_ab_N	e2vyxF1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
E	ATP-synt_ab_N	e2vyxE1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
D	ATP-synt_ab_N	e2vyxD1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
C	ATP-synt_ab_N	e2vyxC1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
B	ATP-synt_ab_N	e2vyxB1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: ATP-synt_ab_N	ECOD (v295.2)
A	Flavodoxin_1	e2vyxA1	A: alpha arrays	X: Cystatin-like	H: NTF2-like	T: NTF2-like	F: Flavodoxin_1	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
L	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
K	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
J	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
I	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
H	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
G	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
F	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
E	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
D	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
C	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
B	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)
A	3.30.1660.10	Alpha Beta	2-Layer Sandwich	Dodecin subunit-like	Flavin-binding protein dodecin	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF07311	Dodecin (Dodecin)	Dodecin	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR036694	Dodecin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR009923	Dodecin	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR025543	Dodecin-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR050049	Dodecin, bacteria	Family