2VXF
Solution structure of the LSm-domain of zebrafish RAP55
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2vxfa2 | All beta proteins | Sm-like fold | Sm-like ribonucleoproteins | LSM14 N-terminal domain-like | automated matches | ZEBRA FISH (Danio rerio ) [TaxId: 7955 ], | SCOPe (2.08) |
A | d2vxfa3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | ZEBRA FISH (Danio rerio ) [TaxId: 7955 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.30.100 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12701 | Scd6-like Sm domain (LSM14) | Scd6-like Sm domain | The Scd6-like Sm domain is found in Scd6p from S. cerevisiae, Rap55 from the newt Pleurodeles walt, and its orthologs from fungi, animals, plants and apicomplexans [1]. The domain is also found in Dcp3p and the human EDC3/FLJ21128 protein where it ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
LSM14A PROTEIN |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010920 | LSM domain superfamily | Homologous Superfamily | |
IPR025609 | Lsm14-like, N-terminal | Domain | |
IPR047575 | Sm domain | Domain |