2VUT
Crystal structure of NAD-bound NmrA-AreA zinc finger complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SDR-like | 8058116 | 3000038 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SDR-like | 8058116 | 3000038 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | SDR-like | 8058116 | 3000038 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | SDR-like | 8058116 | 3000038 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | SDR-like | 8058116 | 3000038 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | SDR-like | 8058116 | 3000038 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | SDR-like | 8058116 | 3000038 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | SDR-like | 8058116 | 3000038 | SCOP2B (2022-06-29) |
I | SCOP2 Family | Erythroid transcription factor GATA-1 | 8025406 | 4003617 | SCOP2 (2022-06-29) |
I | SCOP2 Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8037785 | 3000068 | SCOP2 (2022-06-29) |
J | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8037785 | 3000068 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8037785 | 3000068 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8037785 | 3000068 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8037785 | 3000068 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8037785 | 3000068 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8037785 | 3000068 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8037785 | 3000068 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | NmrA | e2vutA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NmrA | ECOD (1.6) |
B | NmrA | e2vutB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NmrA | ECOD (1.6) |
C | NmrA | e2vutC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NmrA | ECOD (1.6) |
D | NmrA | e2vutD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NmrA | ECOD (1.6) |
F | NmrA | e2vutF1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NmrA | ECOD (1.6) |
G | NmrA | e2vutG1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NmrA | ECOD (1.6) |
H | NmrA | e2vutH1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NmrA | ECOD (1.6) |
E | NmrA | e2vutE1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NmrA | ECOD (1.6) |
I | GATA | e2vutI1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: GATA | ECOD (1.6) |
J | GATA | e2vutJ1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: GATA | ECOD (1.6) |
K | GATA | e2vutK1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: GATA | ECOD (1.6) |
L | GATA | e2vutL1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: GATA | ECOD (1.6) |
M | GATA | e2vutM1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: GATA | ECOD (1.6) |
O | GATA | e2vutO1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: GATA | ECOD (1.6) |
P | GATA | e2vutP1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: GATA | ECOD (1.6) |
N | GATA | e2vutN1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: GATA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05368 | NmrA-like family (NmrA) | NmrA-like family | - | Family | |
PF00320 | GATA zinc finger (GATA) | GATA zinc finger | This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008030 | NmrA-like domain | Domain | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR051164 | NmrA-like oxidoreductase | Family | |
IPR013860 | Nitrogen regulatory protein areA, GATA-like domain | Domain | |
IPR011420 | Nitrogen regulatory AreA, N-terminal | Domain | |
IPR013088 | Zinc finger, NHR/GATA-type | Homologous Superfamily | |
IPR000679 | Zinc finger, GATA-type | Domain | |
IPR039355 | Transcription factor GATA | Family |