Re-refinement of MexA adaptor protein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| B | SCOP2 Family | HlyD-like secretion proteins | 8028933 | 4003003 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2 (2022-06-29) |
| C | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | HlyD beta-barrel domain-like | 8041312 | 3002000 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | HlyD C-terminal domain-like | 8092210 | 3002572 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | Single hybrid motif | 8055550 | 3001880 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Inositol_P | e2v4dA1 | A: alpha arrays | X: TAZ domain | H: TAZ domain | T: Lipocalins | F: Inositol_P | ECOD (v295.2) |
| B | Beta-barrel_RND | e2v4dB4 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Beta-barrel_RND | ECOD (v295.2) |
| C | Glyoxalase | e2v4dC8 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Glyoxalase | ECOD (v295.2) |
| D | BSH_RND | e2v4dD4 | A: alpha arrays | X: DEATH domain | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: BSH_RND | ECOD (v295.2) |
| E | Glyoxalase | e2v4dE8 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Glyoxalase | ECOD (v295.2) |
| F | Glyoxalase | e2v4dF8 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Glyoxalase | ECOD (v295.2) |
| G | Glyoxalase | e2v4dG8 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Glyoxalase | ECOD (v295.2) |
| H | Glyoxalase | e2v4dH8 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Glyoxalase | ECOD (v295.2) |
| I | Glyoxalase | e2v4dI8 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Glyoxalase | ECOD (v295.2) |
| J | Glyoxalase | e2v4dJ8 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Glyoxalase | ECOD (v295.2) |
| K | Glyoxalase | e2v4dK8 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Glyoxalase | ECOD (v295.2) |
| L | Glyoxalase | e2v4dL8 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Glyoxalase | ECOD (v295.2) |
| M | Glyoxalase | e2v4dM8 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Glyoxalase | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
AMR Gene: CARD Annotation CARD Database Homepage
| Chains | Accession | Short Name | Description | Provenance Source (Version) |
|---|---|---|---|---|
| ARO:3000377 | MexA | MexA is the membrane fusion protein of the MexAB-OprM multidrug efflux complex. | CARD (4.0.2) |
AMR Gene Family: CARD Annotation CARD Database Homepage
| Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
|---|---|---|---|---|---|
| ARO:0010004 | resistance-nodulation-cell division (RND) antibiotic efflux pump | macrolide antibiotic, fluoroquinolone antibiotic, monobactam, carbapenem, cephalosporin, penicillin beta-lactam, tetracycline antibiotic, peptide antibiotic, aminocoumarin antibiotic, diaminopyrimidine antibiotic, sulfonamide antibiotic, phenicol antibiotic, nonribosomal peptide antibiotics | antibiotic efflux | CARD (4.0.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF25876 | RND MFP, alpha-helical hairpin domain (HH_MFP_RND) | RND MFP, alpha-helical hairpin domain | This domain is found in the periplasmic membrane fusion proteins (MFPs) that are components of the RND tripartite drug efflux pumps. MFPs bridge the outer membrane factor and an inner membrane transporter. The most characterized MFP AcrA connects the ... | Domain | |
| PF25917 | RND MFP, barrel-sandwich hybrid domain (BSH_RND) | RND MFP, barrel-sandwich hybrid domain | This domain is found in the periplasmic membrane fusion proteins (MFPs) that are components of the RND tripartite drug efflux pumps. MFPs bridge the outer membrane factor and an inner membrane transporter. The most characterized MFP AcrA connects the ... | Domain | |
| PF25967 | RND MFPs, C-terminal permuted SH3 domain (RND-MFP_C) | RND MFPs, C-terminal permuted SH3 domain | This domain is found in the periplasmic membrane fusion proteins (MFPs) that are components of the RND tripartite drug efflux pumps. MFPs bridge the outer membrane factor and an inner membrane transporter. The most characterized MFP AcrA connects the ... | Domain | |
| PF25944 | RND MFPs, beta-barrel domain (Beta-barrel_RND) | RND MFPs, beta-barrel domain | This domain is found in the periplasmic membrane fusion proteins (MFPs) that are components of the RND tripartite drug efflux pumps. MFPs bridge the outer membrane factor and an inner membrane transporter. The most characterized MFP AcrA connects the ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| MULTIDRUG RESISTANCE PROTEIN MEXA |
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