2UWJ
Structure of the heterotrimeric complex which regulates type III secretion needle formation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth E] | SCOP2 Family | YscE-like | 8051499 | 4007407 | SCOP2 (2021-05-27) |
A [auth E] | SCOP2 Superfamily | Type III secretion system needle-like | 8053883 | 3000649 | SCOP2 (2021-05-27) |
C [auth G] | SCOP2 Family | YscG-like | 8044951 | 4004220 | SCOP2 (2021-05-27) |
C [auth G] | SCOP2 Superfamily | TPR-like | 8053882 | 3001345 | SCOP2 (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | PF08988 | e2uwjE1 | A: alpha bundles | X: Type III secretion protein YscE (From Topology) | H: Type III secretion protein YscE (From Topology) | T: Type III secretion protein YscE | F: PF08988 | ECOD (1.6) |
C [auth G] | PF09477 | e2uwjG1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF09477 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth E] | 1.20.5.420 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Immunoglobulin FC, subunit C | CATH (4.3.0) |
C [auth G] | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth E] | PF08988 | Type III secretion system, cytoplasmic E component of needle (T3SS_needle_E) | Type III secretion system, cytoplasmic E component of needle | - | Family |
B [auth F] | PF09392 | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F) | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth E] | IPR012671 | Type III export protein PscE/YscE | Family |
B [auth F] | IPR037203 | Type III secretion, needle-protein-like superfamily | Homologous Superfamily |
B [auth F] | IPR021123 | Type III secretion, needle-protein-like | Family |
B [auth F] | IPR011841 | Type III secretion system, needle protein | Family |
C [auth G] | IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily |
C [auth G] | IPR013348 | Type 3 secretion system chaperone YscG/PscG | Family |