2UV8
Crystal structure of yeast fatty acid synthase with stalled acyl carrier protein at 3.1 angstrom resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FabG2_1st | e2uv8A5 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: FabG2_1st | ECOD (1.6) |
A | FabG2_2nd | e2uv8A4 | A: alpha complex topology | X: FAS type I helical domain (From Topology) | H: FAS type I helical domain (From Topology) | T: FAS type I helical domain | F: FabG2_2nd | ECOD (1.6) |
A | adh_short_C2 | e2uv8A3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: adh_short_C2 | ECOD (1.6) |
A | ketoacyl-synt | e2uv8A1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ketoacyl-synt | ECOD (1.6) |
A | Ketoacyl-synt_C_2 | e2uv8A2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Ketoacyl-synt_C_2 | ECOD (1.6) |
B | FabG2_1st | e2uv8B5 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: FabG2_1st | ECOD (1.6) |
B | FabG2_2nd | e2uv8B4 | A: alpha complex topology | X: FAS type I helical domain (From Topology) | H: FAS type I helical domain (From Topology) | T: FAS type I helical domain | F: FabG2_2nd | ECOD (1.6) |
B | adh_short_C2 | e2uv8B3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: adh_short_C2 | ECOD (1.6) |
B | ketoacyl-synt | e2uv8B1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ketoacyl-synt | ECOD (1.6) |
B | Ketoacyl-synt_C_2 | e2uv8B2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Ketoacyl-synt_C_2 | ECOD (1.6) |
C | FabG2_1st | e2uv8C5 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: FabG2_1st | ECOD (1.6) |
C | FabG2_2nd | e2uv8C4 | A: alpha complex topology | X: FAS type I helical domain (From Topology) | H: FAS type I helical domain (From Topology) | T: FAS type I helical domain | F: FabG2_2nd | ECOD (1.6) |
C | adh_short_C2 | e2uv8C3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: adh_short_C2 | ECOD (1.6) |
C | ketoacyl-synt | e2uv8C1 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: ketoacyl-synt | ECOD (1.6) |
C | Ketoacyl-synt_C_2 | e2uv8C2 | A: a/b three-layered sandwiches | X: Thiolase-like (From Topology) | H: Thiolase-like (From Topology) | T: Thiolase-like | F: Ketoacyl-synt_C_2 | ECOD (1.6) |
D [auth G] | EUF08073 | e2uv8G18 | A: alpha bundles | X: N-terminal domain in fatty acid synthase subunit beta (From Topology) | H: N-terminal domain in fatty acid synthase subunit beta (From Topology) | T: N-terminal domain in fatty acid synthase subunit beta | F: EUF08073 | ECOD (1.6) |
D [auth G] | DUF1729 | e2uv8G14 | A: alpha bundles | X: Inserted helical domain in fatty acid synthase subunit beta (From Topology) | H: Inserted helical domain in fatty acid synthase subunit beta (From Topology) | T: Inserted helical domain in fatty acid synthase subunit beta | F: DUF1729 | ECOD (1.6) |
D [auth G] | MaoC_dehydratas | e2uv8G16 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: MaoC_dehydratas | ECOD (1.6) |
D [auth G] | MaoC_dehydrat_N | e2uv8G21 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: MaoC_dehydrat_N | ECOD (1.6) |
D [auth G] | FAS1_thioest_ins | e2uv8G19 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Insertion domain in thioesterase (From Topology) | T: Insertion domain in thioesterase | F: FAS1_thioest_ins | ECOD (1.6) |
D [auth G] | Acyl_transf_1_1st_1 | e2uv8G20 | A: a+b two layers | X: Alpha-beta plaits | H: Probable ACP-binding domain of malonyl-CoA ACP transacylase (From Topology) | T: Probable ACP-binding domain of malonyl-CoA ACP transacylase | F: Acyl_transf_1_1st_1 | ECOD (1.6) |
D [auth G] | FabD_1st_1 | e2uv8G12 | A: a+b two layers | X: Alpha-beta plaits | H: Probable ACP-binding domain of malonyl-CoA ACP transacylase (From Topology) | T: Probable ACP-binding domain of malonyl-CoA ACP transacylase | F: FabD_1st_1 | ECOD (1.6) |
D [auth G] | COG4981_1 | e2uv8G13 | A: a+b two layers | X: Meander beta sheet domain in fatty acid synthase subunit beta (From Topology) | H: Meander beta sheet domain in fatty acid synthase subunit beta (From Topology) | T: Meander beta sheet domain in fatty acid synthase subunit beta | F: COG4981_1 | ECOD (1.6) |
D [auth G] | NMO | e2uv8G15 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: NMO | ECOD (1.6) |
D [auth G] | Acyl_transf_1_1st | e2uv8G17 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: FabD/lysophospholipase-like | F: Acyl_transf_1_1st | ECOD (1.6) |
E [auth H] | EUF08073 | e2uv8H18 | A: alpha bundles | X: N-terminal domain in fatty acid synthase subunit beta (From Topology) | H: N-terminal domain in fatty acid synthase subunit beta (From Topology) | T: N-terminal domain in fatty acid synthase subunit beta | F: EUF08073 | ECOD (1.6) |
E [auth H] | DUF1729 | e2uv8H14 | A: alpha bundles | X: Inserted helical domain in fatty acid synthase subunit beta (From Topology) | H: Inserted helical domain in fatty acid synthase subunit beta (From Topology) | T: Inserted helical domain in fatty acid synthase subunit beta | F: DUF1729 | ECOD (1.6) |
E [auth H] | MaoC_dehydratas | e2uv8H16 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: MaoC_dehydratas | ECOD (1.6) |
E [auth H] | MaoC_dehydrat_N | e2uv8H21 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: MaoC_dehydrat_N | ECOD (1.6) |
E [auth H] | FAS1_thioest_ins | e2uv8H19 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Insertion domain in thioesterase (From Topology) | T: Insertion domain in thioesterase | F: FAS1_thioest_ins | ECOD (1.6) |
E [auth H] | Acyl_transf_1_1st_1 | e2uv8H20 | A: a+b two layers | X: Alpha-beta plaits | H: Probable ACP-binding domain of malonyl-CoA ACP transacylase (From Topology) | T: Probable ACP-binding domain of malonyl-CoA ACP transacylase | F: Acyl_transf_1_1st_1 | ECOD (1.6) |
E [auth H] | FabD_1st_1 | e2uv8H12 | A: a+b two layers | X: Alpha-beta plaits | H: Probable ACP-binding domain of malonyl-CoA ACP transacylase (From Topology) | T: Probable ACP-binding domain of malonyl-CoA ACP transacylase | F: FabD_1st_1 | ECOD (1.6) |
E [auth H] | COG4981_1 | e2uv8H13 | A: a+b two layers | X: Meander beta sheet domain in fatty acid synthase subunit beta (From Topology) | H: Meander beta sheet domain in fatty acid synthase subunit beta (From Topology) | T: Meander beta sheet domain in fatty acid synthase subunit beta | F: COG4981_1 | ECOD (1.6) |
E [auth H] | NMO | e2uv8H15 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: NMO | ECOD (1.6) |
E [auth H] | Acyl_transf_1_1st | e2uv8H17 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: FabD/lysophospholipase-like | F: Acyl_transf_1_1st | ECOD (1.6) |
F [auth I] | EUF08073 | e2uv8I18 | A: alpha bundles | X: N-terminal domain in fatty acid synthase subunit beta (From Topology) | H: N-terminal domain in fatty acid synthase subunit beta (From Topology) | T: N-terminal domain in fatty acid synthase subunit beta | F: EUF08073 | ECOD (1.6) |
F [auth I] | DUF1729 | e2uv8I14 | A: alpha bundles | X: Inserted helical domain in fatty acid synthase subunit beta (From Topology) | H: Inserted helical domain in fatty acid synthase subunit beta (From Topology) | T: Inserted helical domain in fatty acid synthase subunit beta | F: DUF1729 | ECOD (1.6) |
F [auth I] | MaoC_dehydratas | e2uv8I16 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: MaoC_dehydratas | ECOD (1.6) |
F [auth I] | MaoC_dehydrat_N | e2uv8I21 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Thioesterase/thiol ester dehydrase-isomerase (From Topology) | T: Thioesterase/thiol ester dehydrase-isomerase | F: MaoC_dehydrat_N | ECOD (1.6) |
F [auth I] | FAS1_thioest_ins | e2uv8I19 | A: a+b two layers | X: Thioesterase/thiol ester dehydrase-isomerase-like | H: Insertion domain in thioesterase (From Topology) | T: Insertion domain in thioesterase | F: FAS1_thioest_ins | ECOD (1.6) |
F [auth I] | Acyl_transf_1_1st_1 | e2uv8I20 | A: a+b two layers | X: Alpha-beta plaits | H: Probable ACP-binding domain of malonyl-CoA ACP transacylase (From Topology) | T: Probable ACP-binding domain of malonyl-CoA ACP transacylase | F: Acyl_transf_1_1st_1 | ECOD (1.6) |
F [auth I] | FabD_1st_1 | e2uv8I12 | A: a+b two layers | X: Alpha-beta plaits | H: Probable ACP-binding domain of malonyl-CoA ACP transacylase (From Topology) | T: Probable ACP-binding domain of malonyl-CoA ACP transacylase | F: FabD_1st_1 | ECOD (1.6) |
F [auth I] | COG4981_1 | e2uv8I13 | A: a+b two layers | X: Meander beta sheet domain in fatty acid synthase subunit beta (From Topology) | H: Meander beta sheet domain in fatty acid synthase subunit beta (From Topology) | T: Meander beta sheet domain in fatty acid synthase subunit beta | F: COG4981_1 | ECOD (1.6) |
F [auth I] | NMO | e2uv8I15 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: NMO | ECOD (1.6) |
F [auth I] | Acyl_transf_1_1st | e2uv8I17 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: FabD/lysophospholipase-like | F: Acyl_transf_1_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02801 | Beta-ketoacyl synthase, C-terminal domain (Ketoacyl-synt_C) | Beta-ketoacyl synthase, C-terminal domain | The structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. | Domain | |
PF00109 | Beta-ketoacyl synthase, N-terminal domain (ketoacyl-synt) | Beta-ketoacyl synthase, N-terminal domain | The structure of beta-ketoacyl synthase is similar to that of the thiolase family (Pfam:PF00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains m ... | Domain | |
PF18314 | Fatty acid synthase type I helical domain (FAS_I_H) | Fatty acid synthase type I helical domain | This domain is found in the fatty acid synthase (FAS) complex present in species such as Mycobacterium smegmatis and Thermomyces lanuginosus. FAS is a homo-hexameric enzyme that catalyzes synthesis of fatty acid precursors of mycolic acids. This doma ... | Domain | |
PF18325 | Fatty acid synthase subunit alpha Acyl carrier domain (Fas_alpha_ACP) | Fatty acid synthase subunit alpha Acyl carrier domain | This is the acyl carrier domain (ACP) found in fatty acid synthase subunit alpha (FAS2) EC:2.3.1.86 .The fungal type I fatty acid synthase (FAS) is a 2.6 MDa multienzyme complex, catalyzing all necessary steps for the synthesis of long acyl chains. T ... | Domain | |
D [auth G], E [auth H], F [auth I] | PF16073 | Starter unit:ACP transacylase in aflatoxin biosynthesis (SAT) | Starter unit:ACP transacylase in aflatoxin biosynthesis | - | Family |
D [auth G], E [auth H], F [auth I] | PF08354 | Fatty acid synthase subunit beta/Fas1-like, helical (Fas1-AflB-like_hel) | Fatty acid synthase subunit beta/Fas1-like, helical | This domain has been identified in fungi and bacteria. It is found in fatty acid synthase beta subunit from fungi, including Fas1 from yeasts and aflB from Aspergillus parasiticus. This is an inserted helical domain, whose function is not clear, and ... | Domain |
D [auth G], E [auth H], F [auth I] | PF17828 | N-terminal domain in fatty acid synthase subunit beta (FAS_N) | N-terminal domain in fatty acid synthase subunit beta | This entry represents the N-terminal domain found in fatty acid synthase proteins such as Swiss:P07149. | Domain |
D [auth G], E [auth H], F [auth I] | PF22235 | Fatty acid synthase subunit beta, insertion domain (FAS1_thioest_ins) | Fatty acid synthase subunit beta, insertion domain | This entry represents the insertion domain in the thioesterase of fatty acid synthases from fungi and related sequences [1-3]. | Domain |
D [auth G], E [auth H], F [auth I] | PF13452 | N-terminal half of MaoC dehydratase (MaoC_dehydrat_N) | N-terminal half of MaoC dehydratase | It is clear from the structures of bacterial members of MaoC dehydratase, Pfam:PF01575, that the full-length functional dehydratase enzyme is made up of two structures that dimerise to form a whole. Divergence of the N- and C- monomers in higher euka ... | Domain |
D [auth G], E [auth H], F [auth I] | PF17951 | Fatty acid synthase meander beta sheet domain (FAS_meander) | Fatty acid synthase meander beta sheet domain | This domain is found in fungal fatty acid synthase beta chain proteins [3]. | Domain |
D [auth G], E [auth H], F [auth I] | PF01575 | MaoC like domain (MaoC_dehydratas) | MaoC like domain | The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [1]. The MaoC protein is found to share similarity with a wide variety of enzymes; estradiol 17 beta-dehydrogenase 4, peroxisomal hydratase-dehydroge ... | Domain |
D [auth G], E [auth H], F [auth I] | PF00698 | Acyl transferase domain (Acyl_transf_1) | Acyl transferase domain | - | Domain |