2RIR | pdb_00002rir

Crystal structure of dipicolinate synthase, A chain, from Bacillus subtilis

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	D-2-hydroxyacid dehydrogenase-like	8095910	3000044	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	D-2-hydroxyacid dehydrogenase-like	8095910	3000044	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	D-2-hydroxyacid dehydrogenase-like	8095910	3000044	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	D-2-hydroxyacid dehydrogenase-like	8095910	3000044	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	D-2-hydroxyacid dehydrogenase-like	8095910	3000044	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	D-2-hydroxyacid dehydrogenase-like	8095910	3000044	SCOP2B (2022-06-29)
B	SCOP2 Family	Dipicolinate synthase A chain-like	8046347	4005035	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	D-2-hydroxyacid dehydrogenase-like	8095910	3000044	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	D-2-hydroxyacid dehydrogenase-like	8095910	3000044	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Thaumatin	e2rirH1	A: alpha arrays	X: Ntn/PP2C	H: Ntn	T: Penicillin acylase, catalytic domain	F: Thaumatin	ECOD (v295.2)
G	Thaumatin	e2rirG1	A: alpha arrays	X: Ntn/PP2C	H: Ntn	T: Penicillin acylase, catalytic domain	F: Thaumatin	ECOD (v295.2)
F	Thaumatin	e2rirF1	A: alpha arrays	X: Ntn/PP2C	H: Ntn	T: Penicillin acylase, catalytic domain	F: Thaumatin	ECOD (v295.2)
E	AlaDh_PNT_C	e2rirE1	A: alpha arrays	X: Arterivirus nucleocapsid protein	H: Arterivirus nucleocapsid protein	T: Arterivirus nucleocapsid protein	F: AlaDh_PNT_C	ECOD (v295.2)
D	Thaumatin	e2rirD1	A: alpha arrays	X: Ntn/PP2C	H: Ntn	T: Penicillin acylase, catalytic domain	F: Thaumatin	ECOD (v295.2)
C	Thaumatin	e2rirC1	A: alpha arrays	X: Ntn/PP2C	H: Ntn	T: Penicillin acylase, catalytic domain	F: Thaumatin	ECOD (v295.2)
B	Thaumatin	e2rirB1	A: alpha arrays	X: Ntn/PP2C	H: Ntn	T: Penicillin acylase, catalytic domain	F: Thaumatin	ECOD (v295.2)
A	Thaumatin	e2rirA1	A: alpha arrays	X: Ntn/PP2C	H: Ntn	T: Penicillin acylase, catalytic domain	F: Thaumatin	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
G	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
F	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
E	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
D	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
C	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
B	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
A	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF16924	Dipicolinate synthase subunit A N-terminal domain (DpaA_N)	Dipicolinate synthase subunit A N-terminal domain		Domain
A, B, C, D, E A, B, C, D, E, F, G, H	PF01262	Alanine dehydrogenase/PNT, C-terminal domain (AlaDh_PNT_C)	Alanine dehydrogenase/PNT, C-terminal domain	This family now also contains the lysine 2-oxoglutarate reductases.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR031629	Dipicolinate synthase subunit A, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR014215	Dipicolinic acid synthetase subunit A	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR007698	Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain	Domain