Annotations: 2RH0

Crystal structure of NudC domain-containing protein 2 (13542905) from Mus musculus at 1.95 A resolution

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Hsp20 chaperone-like	8064796	3001242	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Hsp20 chaperone-like	8064796	3001242	SCOP2B (2022-06-29)
B	SCOP2 Family	Nuclear movement domain	8064795	4003073	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Hsp20 chaperone-like	8064796	3001242	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	Hsp20 chaperone-like	8064796	3001242	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Rpf1_C	e2rh0D1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: Rpf1_C	ECOD (v294.2)
C	MoeA_C	e2rh0C2	A: beta barrels	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: MoeA_C	ECOD (v294.2)
B	Rpf1_C	e2rh0B1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: Rpf1_C	ECOD (v294.2)
A	PI3_PI4_kinase	e2rh0A1	A: beta barrels	X: Outer membrane meander beta-barrels	H: Porins	T: Porin	F: PI3_PI4_kinase	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.60.40.790	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
D	1.20.5.740	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Single helix bin	CATH (4.3.0)
C	2.60.40.790	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
C	1.20.5.740	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Single helix bin	CATH (4.3.0)
B	2.60.40.790	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
B	1.20.5.740	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Single helix bin	CATH (4.3.0)
A	2.60.40.790	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
A	1.20.5.740	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Single helix bin	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF04969	CS domain (CS)	CS domain	The CS and CHORD (Pfam:PF04968) are fused into a single polypeptide chain in metazoans but are found in separate proteins in plants; this is thought to be indicative of an interaction between CS and CHORD [1]. It has been suggested that the CS domain ...	The CS and CHORD (Pfam:PF04968) are fused into a single polypeptide chain in metazoans but are found in separate proteins in plants; this is thought to be indicative of an interaction between CS and CHORD [1]. It has been suggested that the CS domain is a binding module for HSP90, implying that CS domain-containing proteins are involved in recruiting heat shock proteins to multiprotein assemblies [2]. Two CS domains are found at the N-terminus of Ubiquitin carboxyl-terminal hydrolase 19 (USP19) (Swiss:O94966), these domains may play a role in the interaction of USP19 with cellular inhibitor of apoptosis 2 [3].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	NudC domain-containing protein 2	unfolded protein binding protein binding binding	protein folding biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation	intercellular bridge cellular anatomical structure intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton chromosome chromosomal region kinetochore intercellular bridge cellular anatomical structure intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton chromosome chromosomal region kinetochore chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome centrosome microtubule organizing center cytoplasm cytosol mitotic spindle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR037898	NudC family	Family
A, B, C, D	IPR037902	NudC domain-containing protein 2, p23 domain	Domain
A, B, C, D	IPR007052	CS domain	Domain
A, B, C, D	IPR008978	HSP20-like chaperone	Homologous Superfamily

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.