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 2RCD | pdb_00002rcd

CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM DUF3225 FAMILY (ECA3500) FROM PECTOBACTERIUM ATROSEPTICUM SCRI1043 AT 2.32 A RESOLUTION

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd2rcdd2 Alpha and beta proteins (a+b) Cystatin-like NTF2-like BxeB1374-like Uncharacterized protein ECA3500 (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], SCOPe (2.08)
Dd2rcdd3 Artifacts Tags Tags Tags N-terminal Tags (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], SCOPe (2.08)
Cd2rcdc2 Alpha and beta proteins (a+b) Cystatin-like NTF2-like BxeB1374-like Uncharacterized protein ECA3500 (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], SCOPe (2.08)
Cd2rcdc3 Artifacts Tags Tags Tags N-terminal Tags (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], SCOPe (2.08)
Bd2rcdb2 Alpha and beta proteins (a+b) Cystatin-like NTF2-like BxeB1374-like Uncharacterized protein ECA3500 (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], SCOPe (2.08)
Bd2rcdb3 Artifacts Tags Tags Tags N-terminal Tags (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], SCOPe (2.08)
Ad2rcda1 Alpha and beta proteins (a+b) Cystatin-like NTF2-like BxeB1374-like Uncharacterized protein ECA3500 (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], SCOPe (2.08)
Ad2rcda2 Artifacts Tags Tags Tags N-terminal Tags (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyNTF2-like 8036778 3000472 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNTF2-like 8036778 3000472 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNTF2-like 8036778 3000472 SCOP2B (2022-06-29)
ASCOP2 FamilyBxeB1374-like 8024399 4002762 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNTF2-like 8036778 3000472 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DHSP90,HATPase_c_3e2rcdD1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: HSP90,HATPase_c_3ECOD (v295.2)
CHSP90,HATPase_c_3e2rcdC1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: HSP90,HATPase_c_3ECOD (v295.2)
BHSP90,HATPase_c_3e2rcdB1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: HSP90,HATPase_c_3ECOD (v295.2)
AHSP90,HATPase_c_3e2rcdA1 A: alpha arraysX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: HSP90,HATPase_c_3ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
C3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
B3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
A3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF11533AtzH-like (AtzH-like)AtzH-likeThis bacterial family of proteins includes AtzH from Pseudomonas sp. sp. AtzH is thought to be an amidase responsible for converting 1,3-dicarboxyurea to allophanate. This protein, which adopts a dimeric assembly, shows a seven-stranded anti-parallel ...This bacterial family of proteins includes AtzH from Pseudomonas sp. sp. AtzH is thought to be an amidase responsible for converting 1,3-dicarboxyurea to allophanate. This protein, which adopts a dimeric assembly, shows a seven-stranded anti-parallel beta- sheet and three helices [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR024507AtzH-likeFamily
A, B, C, D
IPR032710NTF2-like domain superfamilyHomologous Superfamily