2QLC
The crystal structure of DNA repair protein RadC from Chlorobium tepidum TLS
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | JAB1/MPN domain-like | 8053288 | 3001105 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | JAB1/MPN domain-like | 8053288 | 3001105 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | JAB1/MPN domain-like | 8053288 | 3001105 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | JAB1/MPN domain-like | 8053288 | 3001105 | SCOP2B (2022-06-29) |
E | SCOP2 Family | RadC JAB domain-like | 8045115 | 4004298 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | JAB1/MPN domain-like | 8053288 | 3001105 | SCOP2 (2022-06-29) |
F | SCOP2B Superfamily | JAB1/MPN domain-like | 8053288 | 3001105 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | JAB1/MPN domain-like | 8053288 | 3001105 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | JAB1/MPN domain-like | 8053288 | 3001105 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | RadC | e2qlcA1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: RadC | ECOD (1.6) |
B | RadC | e2qlcB1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: RadC | ECOD (1.6) |
C | RadC | e2qlcC1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: RadC | ECOD (1.6) |
D | RadC | e2qlcD1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: RadC | ECOD (1.6) |
E | RadC | e2qlcE1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: RadC | ECOD (1.6) |
F | RadC | e2qlcF1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: RadC | ECOD (1.6) |
G | RadC | e2qlcG1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: RadC | ECOD (1.6) |
H | RadC | e2qlcH1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: RadC | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
B | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
C | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
D | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
E | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
F | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
G | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
H | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
DNA repair protein radC homolog | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037518 | MPN domain | Domain | |
IPR010994 | RuvA domain 2-like | Homologous Superfamily | |
IPR020891 | Uncharacterised protein family UPF0758, conserved site | Conserved Site | |
IPR046778 | UPF0758, N-terminal | Domain | |
IPR025657 | RadC-like JAB domain | Domain | |
IPR001405 | Uncharacterised protein family UPF0758 | Family |