Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2q9qa1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF2 C-terminal domain-like DNA replication complex GINS protein PSF2 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad2q9qa2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed2q9qe1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF2 C-terminal domain-like DNA replication complex GINS protein PSF2 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed2q9qe2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd2q9qb1 All alpha proteins GINS helical bundle-like GINS helical bundle-like SLD5 N-terminal domain-like GINS complex subunit 4, SLD5 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd2q9qb2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain SLD5 C-terminal domain-like GINS complex subunit 4, SLD5 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd2q9qf1 All alpha proteins GINS helical bundle-like GINS helical bundle-like SLD5 N-terminal domain-like GINS complex subunit 4, SLD5 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd2q9qf2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain SLD5 C-terminal domain-like GINS complex subunit 4, SLD5 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd2q9qc_ All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF1 N-terminal domain-like automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd2q9qg_ All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF1 N-terminal domain-like automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd2q9qh1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF3 C-terminal domain-like GINS complex subunit 3, PSF3 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd2q9qh2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain PSF3 N-terminal domain-like GINS complex subunit 3, PSF3 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd2q9qd1 All alpha proteins GINS helical bundle-like GINS helical bundle-like PSF3 C-terminal domain-like GINS complex subunit 3, PSF3 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd2q9qd2 Alpha and beta proteins (a+b) GINS/PriA/YqbF domain PriA/YqbF domain PSF3 N-terminal domain-like GINS complex subunit 3, PSF3 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGINS helical bundle-like8033892 3001594 SCOP2B (2021-05-27)
ASCOP2B SuperfamilyPriA/YqbF domain8033893 3000274 SCOP2B (2021-05-27)
ESCOP2B SuperfamilyGINS helical bundle-like8033892 3001594 SCOP2B (2021-05-27)
ESCOP2B SuperfamilyPriA/YqbF domain8033893 3000274 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyGINS helical bundle-like8033896 3001594 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyPriA/YqbF domain8033897 3000274 SCOP2B (2021-05-27)
FSCOP2B SuperfamilyPriA/YqbF domain8033897 3000274 SCOP2B (2021-05-27)
FSCOP2B SuperfamilyGINS helical bundle-like8033896 3001594 SCOP2B (2021-05-27)
CSCOP2B SuperfamilyGINS helical bundle-like8033891 3001594 SCOP2B (2021-05-27)
GSCOP2B SuperfamilyGINS helical bundle-like8033891 3001594 SCOP2B (2021-05-27)
HSCOP2B SuperfamilyGINS helical bundle-like8035318 3001594 SCOP2B (2021-05-27)
HSCOP2B SuperfamilyPriA/YqbF domain8035319 3000274 SCOP2B (2021-05-27)
DSCOP2 FamilyPSF3 C-terminal domain-like8022938 4001448 SCOP2 (2021-05-27)
DSCOP2 FamilyPSF3 N-terminal domain-like8022939 4001716 SCOP2 (2021-05-27)
DSCOP2 SuperfamilyGINS helical bundle-like8035318 3001594 SCOP2 (2021-05-27)
DSCOP2 SuperfamilyPriA/YqbF domain8035319 3000274 SCOP2 (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF05916e2q9qA1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
AF_UNCLASSIFIEDe2q9qA2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
EPF05916e2q9qE1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
EF_UNCLASSIFIEDe2q9qE2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
BPF05916e2q9qB1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
BPF16922e2q9qB2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF16922ECOD (1.6)
FPF05916e2q9qF1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
FPF16922e2q9qF2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF16922ECOD (1.6)
CPF05916e2q9qC1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
GPF05916e2q9qG1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
HPF05916e2q9qH1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
HPF22466e2q9qH2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)
DPF05916e2q9qD1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
DPF22466e2q9qD2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, E
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
B, F
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
B, F
PF16922DNA replication complex GINS protein SLD5 C-terminus (SLD5_C)DNA replication complex GINS protein SLD5 C-terminusThe C-terminal domain of DNA replication complex GINS protein SLD5 is important in the assembly of the GINS complex, a complex which is involved in initiation of DNA replication and progression of DNA replication forks [1].Domain
C, G
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
D, H
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
D, H
PF22466GINS/PriA/YqbF domain (GINS_N)GINS/PriA/YqbF domainThis entry represents the GINS/PriA/YqbF domain, which is found in the N-terminal region of the GINS complex protein. The GINS complex is crucial for the establishment of DNA replication forks and replisome progression in eukaryotes. The crystal stru ...This entry represents the GINS/PriA/YqbF domain, which is found in the N-terminal region of the GINS complex protein. The GINS complex is crucial for the establishment of DNA replication forks and replisome progression in eukaryotes. The crystal structure of the human GINS complex reveals a heterotetrameric assembly with a pseudo symmetrical layered structure. The complex consists of two heterodimers that create four subunit-subunit interfaces. The subunit structures of the heterodimers consist of two alternating domains, an alpha-helix-rich (A) domain Pfam:PF05916 and a beta-strand-rich (B) domain (this entry).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, E
DNA replication complex GINS protein PSF2-
B, F
GINS complex subunit 4-
C, G
DNA replication complex GINS protein PSF1-
D, H
GINS complex subunit 3-

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, E
PharosQ9Y248
B, F
PharosQ9BRT9
C, G
PharosQ14691
D, H
PharosQ9BRX5