Crystal structure of Q88U62_LACPL from Lactobacillus plantarum. Northeast Structural Genomics target LpR71
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | d2pjqd_ | All alpha proteins | HD-domain/PDEase-like | HD-domain/PDEase-like | HD domain | Uncharacterized protein LP2664 | (Lactiplantibacillus plantarum WCFS1 ) [TaxId: 220668 ], | SCOPe (2.08) |
| C | d2pjqc_ | All alpha proteins | HD-domain/PDEase-like | HD-domain/PDEase-like | HD domain | Uncharacterized protein LP2664 | (Lactiplantibacillus plantarum WCFS1 ) [TaxId: 220668 ], | SCOPe (2.08) |
| B | d2pjqb_ | All alpha proteins | HD-domain/PDEase-like | HD-domain/PDEase-like | HD domain | Uncharacterized protein LP2664 | (Lactiplantibacillus plantarum WCFS1 ) [TaxId: 220668 ], | SCOPe (2.08) |
| A | d2pjqa1 | All alpha proteins | HD-domain/PDEase-like | HD-domain/PDEase-like | HD domain | Uncharacterized protein LP2664 | (Lactiplantibacillus plantarum WCFS1 ) [TaxId: 220668 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | HD-domain/PDEase-like | 8035744 | 3000943 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | HD-domain/PDEase-like | 8035744 | 3000943 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | HD-domain/PDEase-like | 8035744 | 3000943 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | HD domain-like | 8023364 | 4000705 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | HD-domain/PDEase-like | 8035744 | 3000943 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | e2pjqD1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: Propep_M14 | F: | ECOD (20:10:01) | |
| C | e2pjqC1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: Propep_M14 | F: | ECOD (20:10:01) | |
| B | e2pjqB1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: Propep_M14 | F: | ECOD (20:10:01) | |
| A | e2pjqA1 | A: PDEase-like | X: HD-domain/PDEase-like | H: HD-domain/PDEase-like | T: HD | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 1.10.472.50 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
| D | 1.20.58.1910 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
| C | 1.10.472.50 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
| C | 1.20.58.1910 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
| B | 1.10.472.50 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
| B | 1.20.58.1910 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
| A | 1.10.472.50 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
| A | 1.20.58.1910 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
