CRYSTAL STRUCTURE OF A RMLC-LIKE CUPIN (SFRI_3105) FROM SHEWANELLA FRIGIDIMARINA NCIMB 400 AT 1.90 A RESOLUTION
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | SH3_1 | e2pfwA1 | A: a/b three-layered sandwiches | X: Profilin-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: SH3_1 | ECOD (v294.1) |
| B | Biopterin_H | e2pfwB1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: Biopterin_H | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
| B | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07883 | Cupin domain (Cupin_2) | Cupin domain | This family represents the conserved barrel domain of the 'cupin' superfamily [1] ('cupa' is the Latin term for a small barrel). | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily | |
| IPR025499 | Pectin degradation protein KdgF | Family | |
| IPR013096 | Cupin 2, conserved barrel | Domain | |
| IPR052535 | Bacilysin biosynthesis H2HPP isomerase | Family | |
| IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |














