2PCD
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM PSEUDOMONAS AERUGINOSA AT 2.15 ANGSTROMS RESOLUTION
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2021-05-27) |
C [auth B] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2021-05-27) |
E [auth C] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2021-05-27) |
G [auth D] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2021-05-27) |
I [auth E] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2021-05-27) |
K [auth F] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8040371 | 3000868 | SCOP2B (2021-05-27) |
B [auth M] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2021-05-27) |
D [auth N] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2021-05-27) |
F [auth O] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2021-05-27) |
H [auth P] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2021-05-27) |
J [auth Q] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2021-05-27) |
L [auth R] | SCOP2B Superfamily | Aromatic compound dioxygenase | 8032517 | 3000868 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00775 | e2pcdA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
C [auth B] | PF00775 | e2pcdB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
E [auth C] | PF00775 | e2pcdC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
G [auth D] | PF00775 | e2pcdD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
I [auth E] | PF00775 | e2pcdE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
K [auth F] | PF00775 | e2pcdF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775 | ECOD (1.6) |
B [auth M] | PF00775,PF12391 | e2pcdM1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
D [auth N] | PF00775,PF12391 | e2pcdN1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
F [auth O] | PF00775,PF12391 | e2pcdO1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
H [auth P] | PF00775,PF12391 | e2pcdP1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
J [auth Q] | PF00775,PF12391 | e2pcdQ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
L [auth R] | PF00775,PF12391 | e2pcdR1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PF00775,PF12391 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00775 | Dioxygenase (Dioxygenase_C) | Dioxygenase | - | Domain | |
PF12391 | Protocatechuate 3,4-dioxygenase beta subunit N terminal (PCDO_beta_N) | Protocatechuate 3,4-dioxygenase beta subunit N terminal | - | Family | |
PF00775 | Dioxygenase (Dioxygenase_C) | Dioxygenase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012786 | Protocatechuate 3,4-dioxygenase, alpha subunit | Family | |
IPR000627 | Intradiol ring-cleavage dioxygenase, C-terminal | Domain | |
IPR015889 | Intradiol ring-cleavage dioxygenase, core | Homologous Superfamily | |
IPR012785 | Protocatechuate 3,4-dioxygenase, beta subunit | Family | |
IPR000627 | Intradiol ring-cleavage dioxygenase, C-terminal | Domain | |
IPR024756 | Protocatechuate 3,4-dioxygenase beta subunit, N-terminal | Domain | |
IPR015889 | Intradiol ring-cleavage dioxygenase, core | Homologous Superfamily |