2OKF
CRYSTAL STRUCTURE OF A FDXN ELEMENT EXCISION CONTROLLING FACTOR PROTEIN (AVA_3312) FROM ANABAENA VARIABILIS AT 1.60 A RESOLUTION
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2okfa1 | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | XisH-like | FdxN element excision controlling factor protein | (Trichormus variabilis ) [TaxId: 264691 ], | SCOPe (2.08) |
B | d2okfb_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | XisH-like | FdxN element excision controlling factor protein | (Trichormus variabilis ) [TaxId: 264691 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | XisH-like | 8022717 | 4002246 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Restriction endonuclease-like | 8035097 | 3000104 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Restriction endonuclease-like | 8035097 | 3000104 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | XisH | e2okfA1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: XisH | ECOD (1.6) |
B | XisH | e2okfB1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: XisH | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.1350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Trna Endonuclease | Chain: A, domain 1 | CATH (4.3.0) |
B | 3.40.1350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Trna Endonuclease | Chain: A, domain 1 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
FdxN element excision controlling factor protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011335 | Restriction endonuclease type II-like | Homologous Superfamily | |
IPR011856 | tRNA endonuclease-like domain superfamily | Homologous Superfamily | |
IPR014919 | XisH protein | Family |