Crystal Structure of Yellow Fluorescent Protein from Zoanthus sp. at 1.8 A Resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2ogrb_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | automated matches | automated matches | (Zoanthus sp. ) [TaxId: 105402 ], | SCOPe (2.08) |
| C | d2ogrc_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | automated matches | automated matches | (Zoanthus sp. ) [TaxId: 105402 ], | SCOPe (2.08) |
| D | d2ogrd_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | automated matches | automated matches | (Zoanthus sp. ) [TaxId: 105402 ], | SCOPe (2.08) |
| A | d2ogra_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | automated matches | automated matches | (Zoanthus sp. ) [TaxId: 105402 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | GFP-like | 8081053 | 3000576 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | GFP-like | 8081053 | 3000576 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | GFP-like | 8081053 | 3000576 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Fluorescent proteins | 8081052 | 4001049 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | GFP-like | 8081053 | 3000576 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Rpf1_C | e2ogrB1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: Rpf1_C | ECOD (v295.2) |
| C | Rpf1_C | e2ogrC1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: Rpf1_C | ECOD (v295.2) |
| D | Rpf1_C | e2ogrD1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: Rpf1_C | ECOD (v295.2) |
| A | Rpf1_C | e2ogrA1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: Rpf1_C | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| C | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| D | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| A | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| FLUORESCENT PROTEIN FP538 | - | - |