2OGB
Crystal structure of the C-terminal domain of mouse Nrdp1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2ogba_ | Alpha and beta proteins (a+b) | NRDP1 C-terminal domain-like | NRDP1 C-terminal domain-like | USP8 interacting domain | E3 ubiquitin-protein ligase NRDP1 | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B | d2ogbb2 | Alpha and beta proteins (a+b) | NRDP1 C-terminal domain-like | NRDP1 C-terminal domain-like | USP8 interacting domain | E3 ubiquitin-protein ligase NRDP1 | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B | d2ogbb3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF08941 | e2ogbA1 | A: a+b complex topology | X: USP8 interacting domain (From Topology) | H: USP8 interacting domain (From Topology) | T: USP8 interacting domain | F: PF08941 | ECOD (1.6) |
B | PF08941 | e2ogbB1 | A: a+b complex topology | X: USP8 interacting domain (From Topology) | H: USP8 interacting domain (From Topology) | T: USP8 interacting domain | F: PF08941 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08941 | USP8 interacting (USP8_interact) | USP8 interacting | This domain interacts with the UBP deubiquitinating enzyme USP8. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013010 | Zinc finger, SIAH-type | Domain | |
IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site | |
IPR015036 | E3 ubiquitin-protein ligase NRDP1 | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR037255 | NRDP1, C-terminal | Homologous Superfamily | |
IPR001841 | Zinc finger, RING-type | Domain |