Crystal structure of putative dioxygenase (YP_555069.1) from Burkholderia Xenovorans LB400 at 1.70 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2nyhb_ | Alpha and beta proteins (a+b) | Ferredoxin-like | DOPA-like | DOPA dioxygenase-like | Putative dioxygenase BxeB0224 | (Paraburkholderia xenovorans ) [TaxId: 36873 ], | SCOPe (2.08) |
| A | d2nyha1 | Alpha and beta proteins (a+b) | Ferredoxin-like | DOPA-like | DOPA dioxygenase-like | Putative dioxygenase BxeB0224 | (Paraburkholderia xenovorans ) [TaxId: 36873 ], | SCOPe (2.08) |
| A | d2nyha2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Paraburkholderia xenovorans ) [TaxId: 36873 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | RNase_P_Rpp14 | e2nyhB1 | A: beta barrels | X: ETN0001 domain-like | H: Rpp14/Pop5-like | T: Rpp14/Pop5-like | F: RNase_P_Rpp14 | ECOD (v294.2) |
| A | RNase_P_Rpp14 | e2nyhA1 | A: beta barrels | X: ETN0001 domain-like | H: Rpp14/Pop5-like | T: Rpp14/Pop5-like | F: RNase_P_Rpp14 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.30.70.1240 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | DOPA-like domains | CATH (4.3.0) |
| A | 3.30.70.1240 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | DOPA-like domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF08883 | Dopa 4,5-dioxygenase family (DOPA_dioxygen) | Dopa 4,5-dioxygenase family | This family of proteins are related to Swiss:P87064 a DOPA 4,5-dioxygenase that is involved in synthesis of betalain. DOPA-dioxygenase is the key enzyme involved in betalain biosynthesis. It converts 3,4-dihydroxyphenylalanine to betalamic acid, a ye ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative dioxygenase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR023389 | DOPA-like superfamily | Homologous Superfamily | |
| IPR014980 | Dopa 4,5-dioxygenase | Family |














