2NOH
Structure of catalytically inactive Q315A human 8-oxoguanine glycosylase complexed to 8-oxoguanine DNA
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d2noha1 | All alpha proteins | DNA-glycosylase | DNA-glycosylase | DNA repair glycosylase, 2 C-terminal domains | 8-oxoguanine glycosylase | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth A] | d2noha2 | Alpha and beta proteins (a+b) | TBP-like | TATA-box binding protein-like | DNA repair glycosylase, N-terminal domain | 8-oxoguanine glycosylase | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth A] | d2noha3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | TATA-box binding protein-like | 8036320 | 3000705 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | DNA-glycosylase | 8036319 | 3000905 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | PF00730 | e2nohA1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF00730 | ECOD (1.6) |
C [auth A] | PF07934 | e2nohA2 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: PF07934 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 3.30.310.40 | Alpha Beta | 2-Layer Sandwich | TATA-Binding Protein | CATH (4.3.0) | |
C [auth A] | 1.10.1670.10 | Mainly Alpha | Orthogonal Bundle | Endonuclease Iii, domain 2 | Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | CATH (4.3.0) |
C [auth A] | 1.10.340.30 | Mainly Alpha | Orthogonal Bundle | Endonuclease III | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A] | PF07934 | 8-oxoguanine DNA glycosylase, N-terminal domain (OGG_N) | 8-oxoguanine DNA glycosylase, N-terminal domain | - | Family |
C [auth A] | PF00730 | HhH-GPD superfamily base excision DNA repair protein (HhH-GPD) | HhH-GPD superfamily base excision DNA repair protein | This family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate [2]. This includes endonucle ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A] | IPR003265 | HhH-GPD domain | Domain |
C [auth A] | IPR023170 | Helix-hairpin-helix, base-excision DNA repair, C-terminal | Homologous Superfamily |
C [auth A] | IPR011257 | DNA glycosylase | Homologous Superfamily |
C [auth A] | IPR052054 | Oxidative DNA damage repair enzyme | Family |
C [auth A] | IPR012904 | 8-oxoguanine DNA glycosylase, N-terminal | Domain |
C [auth A] | IPR004577 | 8-oxoguanine DNA-glycosylase | Family |