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Solution structure of Ph1500: a homohexameric protein centered on a 12-bladed beta-propeller


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Fe2m3xF1 A: alpha arraysX: Kringle-likeH: P7 channel of Hepatitis C virusT: P7 channel of Hepatitis C virusF:ECOD (v295.2)
FLdl_recept_ae2m3xF2 A: alpha arraysX: RuvA-CH: post-HMGL domain-likeT: post-HMGL domain-likeF: Ldl_recept_aECOD (v295.2)
Ee2m3xE1 A: alpha arraysX: Kringle-likeH: P7 channel of Hepatitis C virusT: P7 channel of Hepatitis C virusF:ECOD (v295.2)
ELdl_recept_ae2m3xE2 A: alpha arraysX: RuvA-CH: post-HMGL domain-likeT: post-HMGL domain-likeF: Ldl_recept_aECOD (v295.2)
De2m3xD1 A: alpha arraysX: Kringle-likeH: P7 channel of Hepatitis C virusT: P7 channel of Hepatitis C virusF:ECOD (v295.2)
DLdl_recept_ae2m3xD2 A: alpha arraysX: RuvA-CH: post-HMGL domain-likeT: post-HMGL domain-likeF: Ldl_recept_aECOD (v295.2)
Ce2m3xC1 A: alpha arraysX: Kringle-likeH: P7 channel of Hepatitis C virusT: P7 channel of Hepatitis C virusF:ECOD (v295.2)
CLdl_recept_ae2m3xC2 A: alpha arraysX: RuvA-CH: post-HMGL domain-likeT: post-HMGL domain-likeF: Ldl_recept_aECOD (v295.2)
Be2m3xB1 A: alpha arraysX: Kringle-likeH: P7 channel of Hepatitis C virusT: P7 channel of Hepatitis C virusF:ECOD (v295.2)
BLdl_recept_ae2m3xB2 A: alpha arraysX: RuvA-CH: post-HMGL domain-likeT: post-HMGL domain-likeF: Ldl_recept_aECOD (v295.2)
Ae2m3xA1 A: alpha arraysX: Kringle-likeH: P7 channel of Hepatitis C virusT: P7 channel of Hepatitis C virusF:ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (4.3.0)
F2.40.10.360 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
E3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (4.3.0)
E2.40.10.360 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
D3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (4.3.0)
D2.40.10.360 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
C3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (4.3.0)
C2.40.10.360 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
B3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (4.3.0)
B2.40.10.360 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
A3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (4.3.0)
A2.40.10.360 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR029067CDC48 domain 2-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR004201CDC48, domain 2Domain
A, B, C, D, E
IPR049295Domain of unknown function DUF6849Domain