2LSP
solution structures of BRD4 second bromodomain with NF-kB-K310ac peptide
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.20.920.10 | Mainly Alpha | Up-down Bundle | Histone Acetyltransferase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00439 | Bromodomain (Bromodomain) | Bromodomain | Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR033926 | NFkappaB IPT domain | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR011539 | Rel homology domain, DNA-binding domain | Domain | |
IPR030495 | Transcription factor p65, RHD domain, N-terminal | Domain | |
IPR002909 | IPT domain | Domain | |
IPR030492 | Rel homology domain, conserved site | Conserved Site | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR037059 | Rel homology domain (RHD), DNA-binding domain superfamily | Homologous Superfamily | |
IPR008967 | p53-like transcription factor, DNA-binding domain superfamily | Homologous Superfamily | |
IPR000451 | NF-kappa-B/Dorsal | Family | |
IPR032397 | Rel homology dimerisation domain | Domain | |
IPR043508 | Brdt, bromodomain, repeat I | Domain | |
IPR027353 | NET domain | Domain | |
IPR043509 | Brdt, bromodomain, repeat II | Domain | |
IPR018359 | Bromodomain, conserved site | Conserved Site | |
IPR001487 | Bromodomain | Domain | |
IPR038336 | NET domain superfamily | Homologous Superfamily | |
IPR031354 | Bromodomain protein 4, C-terminal | Domain | |
IPR036427 | Bromodomain-like superfamily | Homologous Superfamily |