Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Azf-CCHCe2li8A1 A: few secondary structure elementsX: CCHC-type 1 zinc fingerH: CCHC-type 1 zinc finger (From Topology)T: CCHC-type 1 zinc fingerF: zf-CCHCECOD (1.6)
Azf-CCHC_2_like_1e2li8A2 A: few secondary structure elementsX: CCHC-type 1 zinc fingerH: CCHC-type 1 zinc finger (From Topology)T: CCHC-type 1 zinc fingerF: zf-CCHC_2_like_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A4.10.60.10 Few Secondary Structures Irregular HIV-1 Nucleocapsid Protein Zinc finger, CCHC-typeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF21890Lin-28A-like, second zinc knuckle (Lin-28A-like_zf-CCHC_2)Lin-28A-like, second zinc knuckleThis domain is found at the C-terminal end of human Protein lin-28 homolog A (Lin-28A), an RNA-binding protein that inhibits processing of pre-let-7 miRNAs and regulates translation of mRNAs that control developmental timing, pluripotency and metabol ...This domain is found at the C-terminal end of human Protein lin-28 homolog A (Lin-28A), an RNA-binding protein that inhibits processing of pre-let-7 miRNAs and regulates translation of mRNAs that control developmental timing, pluripotency and metabolism. This interaction requires the zinc-knuckle domains of Lin-28A [1-3]. This entry represents the second of these domains.
Domain
PF00098Zinc knuckle (zf-CCHC)Zinc knuckleThe zinc knuckle is a zinc binding motif composed of the the following CX2CX4HX4C where X can be any amino acid. The motifs are mostly from retroviral gag proteins (nucleocapsid). Prototype structure is from HIV. Also contains members involved in eu ...The zinc knuckle is a zinc binding motif composed of the the following CX2CX4HX4C where X can be any amino acid. The motifs are mostly from retroviral gag proteins (nucleocapsid). Prototype structure is from HIV. Also contains members involved in eukaryotic gene regulation, such as C. elegans GLH-1. Structure is an 18-residue zinc finger.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Protein lin-28 homolog A
RNA (5'-R(*AP*GP*GP*AP*GP*AP*U)-3')---