NMR structure of the PhyRSL-NepR complex from Sphingomonas sp. Fr1
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | NepR | e2lfwB1 | A: beta barrels | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related | T: Glycoside hydrolase family 127 middle domain-related | F: NepR | ECOD (v294.2) |
| A | PhyR_sigma2 | e2lfwA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: PhyR_sigma2 | ECOD (v294.2) |
| A | ADH_zinc_N | e2lfwA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: ADH_zinc_N | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.20.140.160 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| NepR anti sigma factor | - | - | ||
| PhyR sigma-like domain | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR041649 | Anti-sigma factor NepR | Domain | |
| IPR014605 | Signal transduction response regulator PhyR-like, alphaproteobacteria | Family | |
| IPR011006 | CheY-like superfamily | Homologous Superfamily | |
| IPR001789 | Signal transduction response regulator, receiver domain | Domain | |
| IPR050595 | Bacterial response regulator | Family | |
| IPR053867 | PhyR, sigma4 domain | Domain | |
| IPR053866 | PhyR, sigma2 domain | Domain |














