2JWG
Structure of a Glycosylphosphatidylinositol-anchored Domain from a Trypanosome Variant Surface Glycoprotein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Trypan_glycop_C_like_1 | e2jwgA1 | A: few secondary structure elements | X: Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain (From Topology) | H: Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain (From Topology) | T: Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain | F: Trypan_glycop_C_like_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1680.30 | Alpha Beta | 2-Layer Sandwich | ligand-binding face of the semaphorins, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF10659 | Trypanosome variant surface glycoprotein C-terminal domain (Trypan_glycop_C) | Trypanosome variant surface glycoprotein C-terminal domain | The trypanosome parasite expresses these proteins to evade the immune response. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019609 | Trypanosome variant surface glycoprotein, C-terminal | Domain | |
IPR001812 | Trypanosome variant surface glycoprotein, A-type, N-terminal domain | Domain |