2JW1
Structural characterization of the type III pilotin-secretin interaction in Shigella flexneri by NMR spectroscopy
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.128.230 | Mainly Beta | Beta Barrel | Lipocalin | Pilot protein MxiM | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11441 | Pilot protein MxiM (MxiM) | Pilot protein MxiM | MxiM, a Shigella pilot protein, is essential for the assembly and membrane association of the Shigella secretin MxiD. MxiM contains an orthologous secretin component and has a specific binding domain for the acyl chains of bacterial lipids [1]. The C ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038517 | MxiM superfamily | Homologous Superfamily | |
IPR021546 | Pilot protein MxiM | Family | |
IPR050810 | Bacterial Secretion System Channel Protein | Family | |
IPR005644 | NolW-like | Domain | |
IPR004846 | Type II/III secretion system, secretin-like domain | Domain | |
IPR038591 | NolW-like superfamily | Homologous Superfamily | |
IPR003522 | Type III secretion system outer membrane pore YscC/HrcC | Family | |
IPR004845 | Type II secretion system protein GspD, conserved site | Conserved Site | |
IPR049034 | SPI-1 type 3 secretion system secretin, N0 domain | Domain |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
ACE | AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 | :