2J7Z
Crystal Structure of recombinant Human Stromal Cell-Derived Factor- 1alpha
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2j7za_ | Alpha and beta proteins (a+b) | IL8-like | Interleukin 8-like chemokines | Interleukin 8-like chemokines | Stromal cell-derived factor-1 (SDF-1) | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d2j7zb_ | Alpha and beta proteins (a+b) | IL8-like | Interleukin 8-like chemokines | Interleukin 8-like chemokines | Stromal cell-derived factor-1 (SDF-1) | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Interleukin 8-like chemokines | 8030672 | 4000912 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Interleukin 8-like chemokines | 8043051 | 3001955 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Interleukin 8-like chemokines | 8043051 | 3001955 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | IL8_1 | e2j7zA1 | A: beta barrels | X: IL8-related (From Homology) | H: IL8-related | T: IL8 | F: IL8_1 | ECOD (1.6) |
B | IL8_1 | e2j7zB1 | A: beta barrels | X: IL8-related (From Homology) | H: IL8-related | T: IL8 | F: IL8_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) | |
B | 2.40.50.40 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00048 | Small cytokines (intecrine/chemokine), interleukin-8 like (IL8) | Small cytokines (intecrine/chemokine), interleukin-8 like | Includes a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity. Structure contains two highly conserved disulfide bonds. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001811 | Chemokine interleukin-8-like domain | Domain | |
IPR036048 | Chemokine interleukin-8-like superfamily | Homologous Superfamily | |
IPR039809 | Chemokine beta/gamma/delta | Family | |
IPR033899 | CXC Chemokine domain | Domain |