2J5Y

Crystal structure of the GA module from F.magna

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2j5ya2	All alpha proteins	immunoglobulin/albumin-binding domain-like	Bacterial immunoglobulin/albumin-binding domains	GA module, an albumin-binding domain	automated matches	(Finegoldia magna ) [TaxId: 1260 ],	SCOPe (2.08)
A	d2j5ya3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Finegoldia magna ) [TaxId: 1260 ],	SCOPe (2.08)
B	d2j5yb2	All alpha proteins	immunoglobulin/albumin-binding domain-like	Bacterial immunoglobulin/albumin-binding domains	GA module, an albumin-binding domain	automated matches	(Finegoldia magna ) [TaxId: 1260 ],	SCOPe (2.08)
B	d2j5yb3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Finegoldia magna ) [TaxId: 1260 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	GA module-like	8022245	4000723	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Bacterial immunoglobulin/albumin-binding domains	8034625	3001373	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Bacterial immunoglobulin/albumin-binding domains	8034625	3001373	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	GA	e2j5yA1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: Bacterial immunoglobulin/albumin-binding domains (From Topology)	T: Bacterial immunoglobulin/albumin-binding domains	F: GA	ECOD (1.6)
B	GA	e2j5yB1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: Bacterial immunoglobulin/albumin-binding domains (From Topology)	T: Bacterial immunoglobulin/albumin-binding domains	F: GA	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.8.40	Mainly Alpha	Orthogonal Bundle	Helicase, Ruva Protein	domain 3	CATH (4.3.0)
B	1.10.8.40	Mainly Alpha	Orthogonal Bundle	Helicase, Ruva Protein	domain 3	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF17573	GA-like domain (GA-like)	GA-like domain	This domain is found in bacterial cell surface proteins. It is related to the GA domain that forms a three helix bundle.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	PEPTOSTREPTOCOCCAL ALBUMIN-BINDING PROTEIN	-	-	extracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR009063	Immunoglobulin/albumin-binding domain superfamily	Homologous Superfamily
A, B	IPR040912	Repeat of unknown function DUF5633	Repeat
A, B	IPR035152	GA-like domain	Domain
A, B	IPR019931	LPXTG cell wall anchor domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.