2J3T
The crystal structure of the bet3-trs33-bet5-trs23 complex.
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2j3ta_ | Alpha and beta proteins (a+b) | Ligand-binding domain in the NO signalling and Golgi transport | Ligand-binding domain in the NO signalling and Golgi transport | TRAPP components | automated matches | MOUSE (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ligand-binding domain in the NO signalling and Golgi transport | 8043404 | 3001668 | SCOP2B (2022-06-29) |
C | SCOP2 Family | Sybindin-like | 8045360 | 4004434 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | SNARE-like | 8090323 | 3001113 | SCOP2 (2022-06-29) |
D | SCOP2 Family | Sybindin-like | 8045359 | 4004434 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | SNARE-like | 8090322 | 3001113 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TRAPP | e2j3tA1 | A: a+b complex topology | X: H-NOX domain (From Topology) | H: H-NOX domain (From Topology) | T: H-NOX domain | F: TRAPP | ECOD (1.6) |
B | TRAPP | e2j3tB1 | A: a+b complex topology | X: H-NOX domain (From Topology) | H: H-NOX domain (From Topology) | T: H-NOX domain | F: TRAPP | ECOD (1.6) |
C | Sybindin | e2j3tC1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Sybindin | ECOD (1.6) |
D | KOG1945 | e2j3tD2 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: KOG1945 | ECOD (1.6) |
D | Sybindin | e2j3tD1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Sybindin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1380.20 | Alpha Beta | 2-Layer Sandwich | Muramoyl-pentapeptide Carboxypeptidase | domain 2 | CATH (4.3.0) |
B | 3.30.1380.20 | Alpha Beta | 2-Layer Sandwich | Muramoyl-pentapeptide Carboxypeptidase | domain 2 | CATH (4.3.0) |
C | 3.30.450.70 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | CATH (4.3.0) | |
D | 3.30.450.70 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04051 | Transport protein particle (TRAPP) component (TRAPP) | Transport protein particle (TRAPP) component | - | Family | |
PF04051 | Transport protein particle (TRAPP) component (TRAPP) | Transport protein particle (TRAPP) component | - | Family | |
PF04099 | Sybindin-like family (Sybindin) | Sybindin-like family | - | Family | |
PF04099 | Sybindin-like family (Sybindin) | Sybindin-like family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR024096 | NO signalling/Golgi transport ligand-binding domain superfamily | Homologous Superfamily | |
IPR007194 | Transport protein particle (TRAPP) component | Family | |
IPR016721 | Bet3 family | Family | |
IPR024096 | NO signalling/Golgi transport ligand-binding domain superfamily | Homologous Superfamily | |
IPR007194 | Transport protein particle (TRAPP) component | Family | |
IPR037992 | TRAPP complex, Trs33 subunit | Family | |
IPR007233 | Trafficking protein particle complex subunit | Family | |
IPR011012 | Longin-like domain superfamily | Homologous Superfamily | |
IPR007233 | Trafficking protein particle complex subunit | Family | |
IPR011012 | Longin-like domain superfamily | Homologous Superfamily |