PF1283- Rubrerythrin from Pyrococcus furiosus iron bound form
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2hr5b1 | All alpha proteins | Ferritin-like | Ferritin-like | Ferritin | Rubrerythrin, N-terminal domain | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
| B | d2hr5b2 | Small proteins | Rubredoxin-like | Rubredoxin-like | Rubredoxin | Rubrerythrin, C-terminal domain | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
| A | d2hr5a1 | All alpha proteins | Ferritin-like | Ferritin-like | Ferritin | Rubrerythrin, N-terminal domain | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
| A | d2hr5a2 | Small proteins | Rubredoxin-like | Rubredoxin-like | Rubredoxin | Rubrerythrin, C-terminal domain | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Ferritin-like | 8036854 | 3001658 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Rubredoxin-like | 8036856 | 3001257 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Ferritin-like | 8036854 | 3001658 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Rubredoxin-like | 8036856 | 3001257 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | HisKA | e2hr5B3 | A: alpha arrays | X: Thioredoxin-like | H: Thioredoxin-like | T: Thioredoxin-like | F: HisKA | ECOD (v295.2) |
| B | Peptidase_M28 | e2hr5B2 | A: alpha arrays | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Peptidase_M28 | ECOD (v295.2) |
| A | HisKA | e2hr5A3 | A: alpha arrays | X: Thioredoxin-like | H: Thioredoxin-like | T: Thioredoxin-like | F: HisKA | ECOD (v295.2) |
| A | TrmK | e2hr5A2 | A: alpha arrays | X: Ribosomal protein L19 (L19e) C-terminal domain | H: Ribosomal protein L19 (L19e) C-terminal domain | T: Ribosomal protein L19 (L19e) C-terminal domain | F: TrmK | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 1.20.1260.10 | Mainly Alpha | Up-down Bundle | Ferritin | Ferritin, core subunit, four-helix bundle | CATH (4.3.0) |
| B | 2.20.28.10 | Mainly Beta | Single Sheet | Rubrerythrin, domain 2 | CATH (4.3.0) | |
| A | 1.20.1260.10 | Mainly Alpha | Up-down Bundle | Ferritin | Ferritin, core subunit, four-helix bundle | CATH (4.3.0) |
| A | 2.20.28.10 | Mainly Beta | Single Sheet | Rubrerythrin, domain 2 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Rubrerythrin | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009040 | Ferritin-like diiron domain | Domain | |
| IPR012347 | Ferritin-like | Homologous Superfamily | |
| IPR009078 | Ferritin-like superfamily | Homologous Superfamily | |
| IPR024934 | Rubredoxin-like domain | Domain | |
| IPR003251 | Rubrerythrin, diiron-binding domain | Domain | |
| IPR052753 | Rubrerythrin-2/Nigerythrin | Family | |
| IPR048574 | Rubrerythrin, rubredoxin-like domain | Domain |