Skip to main content

 2H7A | pdb_00002h7a

NMR Structure of the Conserved Protein YcgL from Escherichia coli representing the DUF709 Family Reveals a Novel a/b/a Sandwich Fold

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2h7aa1 Alpha and beta proteins (a+b) YcgL-like YcgL-like YcgL-like Hypothetical protein YcgL (Escherichia coli CFT073 ) [TaxId: 199310 ], SCOPe (2.08)
Ad2h7aa2 Artifacts Tags Tags Tags N-terminal Tags (Escherichia coli CFT073 ) [TaxId: 199310 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyYcgL-like 8021790 4001814 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyYcgL-like 8034170 3000422 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AYcgLe2h7aA1 A: a+b two layersX: 4Fe-4S ferredoxinH: 4Fe-4S ferredoxinT: 4Fe-4S ferredoxinF: YcgLECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.510.20 Alpha Beta Roll NE1680-like fold YcgL domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05166YcgL domain (YcgL)YcgL domainThis family of proteins formerly called DUF709 includes the E. coli gene ycgL. Homologues of YcgL are found in gammaproteobacteria. The structure of this protein shows a novel alpha/beta/alpha sandwich structure [1]. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR027354YcgL domainDomain
IPR038068YcgL-like superfamilyHomologous Superfamily