The Crystal Structure of Bacillus cereus protein related to NIF3
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2gx8b_ | Alpha and beta proteins (a/b) | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | Nif3-related protein BC4286 | (Bacillus cereus ATCC 14579 ) [TaxId: 226900 ], | SCOPe (2.08) |
| C | d2gx8c_ | Alpha and beta proteins (a/b) | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | Nif3-related protein BC4286 | (Bacillus cereus ATCC 14579 ) [TaxId: 226900 ], | SCOPe (2.08) |
| A | d2gx8a1 | Alpha and beta proteins (a/b) | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | NIF3 (NGG1p interacting factor 3)-like | Nif3-related protein BC4286 | (Bacillus cereus ATCC 14579 ) [TaxId: 226900 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | NIF3-like | 8042095 | 3001101 | SCOP2B (2022-06-29) |
| C | SCOP2 Family | NIF3-like | 8029716 | 4001220 | SCOP2 (2022-06-29) |
| C | SCOP2 Superfamily | NIF3-like | 8042095 | 3001101 | SCOP2 (2022-06-29) |
| A | SCOP2B Superfamily | NIF3-like | 8042095 | 3001101 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | SNase | e2gx8B1 | A: alpha arrays | X: Alpha helical domain of ribonucleotide reductases | H: Alpha helical domain of ribonucleotide reductases | T: Alpha helical domain of ribonucleotide reductases | F: SNase | ECOD (v295.2) |
| C | SNase | e2gx8C1 | A: alpha arrays | X: Alpha helical domain of ribonucleotide reductases | H: Alpha helical domain of ribonucleotide reductases | T: Alpha helical domain of ribonucleotide reductases | F: SNase | ECOD (v295.2) |
| A | e2gx8A2 | A: alpha arrays | X: Inserted helical domain in fatty acid synthase subunit beta | H: Voltage-gated ion channels | T: Voltage-gated ion channels | F: | ECOD (v295.2) | |
| A | fn3 | e2gx8A1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Class I glutamine amidotransferase-like | F: fn3 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.30.70.120 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| C | 3.30.70.120 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| A | 3.30.70.120 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01784 | Duf34/NIF3 (NGG1p interacting factor 3) (DUF34_NIF3) | Duf34/NIF3 (NGG1p interacting factor 3) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| NIF3-related protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR015867 | Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal | Homologous Superfamily | |
| IPR002678 | DUF34/NIF3 | Family | |
| IPR017221 | DUF34/NIF3, bacteria | Family | |
| IPR036069 | DUF34/NIF3 superfamily | Homologous Superfamily |