2GWS
Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
M [auth A] | SCOP2B Superfamily | PsbU/PolX domain-like | 8037850 | 3000893 | SCOP2B (2021-05-27) |
M [auth A] | SCOP2B Superfamily | DNA polymerase beta N-terminal domain-like | 8037849 | 3000524 | SCOP2B (2021-05-27) |
M [auth A] | SCOP2B Superfamily | Nucleotidyltransferase-like | 8037852 | 3000129 | SCOP2B (2021-05-27) |
N [auth E] | SCOP2B Superfamily | Nucleotidyltransferase-like | 8037852 | 3000129 | SCOP2B (2021-05-27) |
N [auth E] | SCOP2B Superfamily | DNA polymerase beta N-terminal domain-like | 8037849 | 3000524 | SCOP2B (2021-05-27) |
N [auth E] | SCOP2B Superfamily | PsbU/PolX domain-like | 8037850 | 3000893 | SCOP2B (2021-05-27) |
O [auth I] | SCOP2B Superfamily | DNA polymerase beta N-terminal domain-like | 8037849 | 3000524 | SCOP2B (2021-05-27) |
O [auth I] | SCOP2B Superfamily | Nucleotidyltransferase-like | 8037852 | 3000129 | SCOP2B (2021-05-27) |
O [auth I] | SCOP2B Superfamily | PsbU/PolX domain-like | 8037850 | 3000893 | SCOP2B (2021-05-27) |
P [auth M] | SCOP2B Superfamily | DNA polymerase beta N-terminal domain-like | 8037849 | 3000524 | SCOP2B (2021-05-27) |
P [auth M] | SCOP2B Superfamily | Nucleotidyltransferase-like | 8037852 | 3000129 | SCOP2B (2021-05-27) |
P [auth M] | SCOP2B Superfamily | PsbU/PolX domain-like | 8037850 | 3000893 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
M [auth A] | PF10391 | e2gwsA1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF10391 | ECOD (1.6) |
M [auth A] | PF14716 | e2gwsA2 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF14716 | ECOD (1.6) |
M [auth A] | PF14791,PF14792 | e2gwsA3 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: PF14791,PF14792 | ECOD (1.6) |
N [auth E] | PF10391 | e2gwsE1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF10391 | ECOD (1.6) |
N [auth E] | PF14716 | e2gwsE2 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF14716 | ECOD (1.6) |
N [auth E] | PF14791,PF14792 | e2gwsE3 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: PF14791,PF14792 | ECOD (1.6) |
O [auth I] | PF10391 | e2gwsI1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF10391 | ECOD (1.6) |
O [auth I] | PF14716 | e2gwsI2 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF14716 | ECOD (1.6) |
O [auth I] | PF14791,PF14792 | e2gwsI3 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: PF14791,PF14792 | ECOD (1.6) |
P [auth M] | PF10391 | e2gwsM1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF10391 | ECOD (1.6) |
P [auth M] | PF14716 | e2gwsM2 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF14716 | ECOD (1.6) |
P [auth M] | PF14791,PF14792 | e2gwsM3 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: PF14791,PF14792 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
M [auth A], N [auth E], O [auth I], P [auth M] | PF14716 | Helix-hairpin-helix domain (HHH_8) | Helix-hairpin-helix domain | - | Domain |
M [auth A], N [auth E], O [auth I], P [auth M] | PF14791 | DNA polymerase beta thumb (DNA_pol_B_thumb) | DNA polymerase beta thumb | - | Family |
M [auth A], N [auth E], O [auth I], P [auth M] | PF14792 | DNA polymerase beta palm (DNA_pol_B_palm) | DNA polymerase beta palm | The catalytic region of DNA polymerase beta is split into three domains. An N-terminal fingers domain, a central palm domain and a C-terminal thumb domain. This entry represents the palm domain [1]. | Domain |
M [auth A], N [auth E], O [auth I], P [auth M] | PF10391 | Fingers domain of DNA polymerase lambda (DNA_pol_lambd_f) | Fingers domain of DNA polymerase lambda | DNA polymerases catalyse the addition of dNMPs onto the 3-prime ends of DNA chains. There is a general polymerase fold consisting of three subdomains that have been likened to the fingers, palm, and thumb of a right hand. DNA_pol_lambd_f is the centr ... | Domain |