Annotations: 2GMY

Crystal Structure of a Protein of Unknown Function ATU0492 from Agrobacterium tumefaciens, Putative Antioxidant Defence Protein AhpD

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d2gmyf_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Hypothetical protein Atu0492	(Agrobacterium fabrum str. C58 ) [TaxId: 176299 ],	SCOPe (2.08)
E	d2gmye_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Hypothetical protein Atu0492	(Agrobacterium fabrum str. C58 ) [TaxId: 176299 ],	SCOPe (2.08)
D	d2gmyd_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Hypothetical protein Atu0492	(Agrobacterium fabrum str. C58 ) [TaxId: 176299 ],	SCOPe (2.08)
C	d2gmyc_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Hypothetical protein Atu0492	(Agrobacterium fabrum str. C58 ) [TaxId: 176299 ],	SCOPe (2.08)
B	d2gmyb_	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Hypothetical protein Atu0492	(Agrobacterium fabrum str. C58 ) [TaxId: 176299 ],	SCOPe (2.08)
A	d2gmya1	All alpha proteins	AhpD-like	AhpD-like	Atu0492-like	Hypothetical protein Atu0492	(Agrobacterium fabrum str. C58 ) [TaxId: 176299 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	AhpD-like	8041965	3001907	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	AhpD-like	8041965	3001907	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	AhpD-like	8041965	3001907	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	AhpD-like	8041965	3001907	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	AhpD-like	8041965	3001907	SCOP2B (2022-06-29)
A	SCOP2 Family	Atu0492-like	8029586	4001608	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	AhpD-like	8041965	3001907	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	Bcl-2	e2gmyF1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Bcl-2	ECOD (v295.2)
E	Bcl-2	e2gmyE1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Bcl-2	ECOD (v295.2)
D	Bcl-2	e2gmyD1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Bcl-2	ECOD (v295.2)
C	Bcl-2	e2gmyC1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Bcl-2	ECOD (v295.2)
B	Bcl-2	e2gmyB1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Bcl-2	ECOD (v295.2)
A	CMD	e2gmyA1	A: alpha arrays	X: AhpD-like	H: AhpD-like	T: AhpD-like	F: CMD	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
E	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
D	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
C	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
B	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)
A	1.20.1290.10	Mainly Alpha	Up-down Bundle	AhpD-like	AhpD-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF02627	Carboxymuconolactone decarboxylase family (CMD)	Carboxymuconolactone decarboxylase family	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR003779	Alkyl hydroperoxide reductase AhpD/CMD-like	Domain
A, B, C, D, E A, B, C, D, E, F	IPR029032	AhpD-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR004675	Alkylhydroperoxidase AhpD core	Domain