Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2gmqa1 All beta proteins PUA domain-like PUA domain-like PrgU-like Uncharacterized protein PrgU (Enterococcus faecalis ) [TaxId: 1351 ], SCOPe (2.08)
Bd2gmqb_ All beta proteins PUA domain-like PUA domain-like PrgU-like automated matches (Enterococcus faecalis ) [TaxId: 1351 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyPrgU-like8021698 4001993 SCOP2 (2021-05-27)
ASCOP2 SuperfamilyPUA domain-like8034078 3001015 SCOP2 (2021-05-27)
BSCOP2B SuperfamilyPUA domain-like8034078 3001015 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF09627e2gmqA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: PF09627ECOD (1.6)
BPF09627e2gmqB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: PF09627ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.450.10 Mainly Beta Beta Barrel PUA domain-like fold PUA domain-like domainCATH (4.3.0)
B2.40.450.10 Mainly Beta Beta Barrel PUA domain-like fold PUA domain-like domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF09627PrgU-like protein (PrgU)PrgU-like proteinPrgU is a protein of plasmid in origin expressed mainly in Enterococcus bacteria. It forms a six beta-strand barrel with three accompanying alpha helices and is probably a homo-dimer in the cell [1]. PrgU probably acts as a RNA-binding regulator that ...PrgU is a protein of plasmid in origin expressed mainly in Enterococcus bacteria. It forms a six beta-strand barrel with three accompanying alpha helices and is probably a homo-dimer in the cell [1]. PrgU probably acts as a RNA-binding regulator that mitigates toxicity accompanying overproduction of PrgB-like adhesins, which are involved in conjugative transfer [2].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR015947PUA-like superfamilyHomologous Superfamily
A, B
IPR018589Pheromone response, PrgU-like domainDomain
A, B
IPR038201PrgU-like superfamilyHomologous Superfamily