2GLU
The crystal structure of YcgJ protein from Bacillus subitilis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2glua1 | Alpha and beta proteins (a/b) | S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | UbiE/COQ5-like | Hypothetical protein YcgJ | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
A | d2glua3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
A | d2glua2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
B | d2glub2 | Alpha and beta proteins (a/b) | S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | UbiE/COQ5-like | Hypothetical protein YcgJ | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
B | d2glub4 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
B | d2glub3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8044210 | 3000118 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8044210 | 3000118 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Methyltransf_11_1 | e2gluA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltransf_11_1 | ECOD (1.6) |
B | Methyltransf_11_1 | e2gluB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltransf_11_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
B | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13649 | Methyltransferase domain (Methyltransf_25) | Methyltransferase domain | This family appears to be a methyltransferase domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
ycgJ | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR013216 | Methyltransferase type 11 | Domain | |
IPR051052 | Diverse substrate methyltransferase | Family |