Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyVP9-like 8089886 3002400 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyVP9-like 8089886 3002400 SCOP2B (2022-06-29)
CSCOP2 FamilyVP9-like 8045252 4004375 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyVP9-like 8089886 3002400 SCOP2 (2022-06-29)
DSCOP2B SuperfamilyVP9-like 8089886 3002400 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AVP9e2gj2A1 A: a+b two layersX: Alpha-beta plaitsH: WSSV VP9 (From Topology)T: WSSV VP9F: VP9ECOD (1.6)
BVP9e2gj2B1 A: a+b two layersX: Alpha-beta plaitsH: WSSV VP9 (From Topology)T: WSSV VP9F: VP9ECOD (1.6)
CVP9e2gj2C1 A: a+b two layersX: Alpha-beta plaitsH: WSSV VP9 (From Topology)T: WSSV VP9F: VP9ECOD (1.6)
DVP9e2gj2D1 A: a+b two layersX: Alpha-beta plaitsH: WSSV VP9 (From Topology)T: WSSV VP9F: VP9ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.2070 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits VP9 protein domainCATH (4.3.0)
B3.30.70.2070 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits VP9 protein domainCATH (4.3.0)
C3.30.70.2070 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits VP9 protein domainCATH (4.3.0)
D3.30.70.2070 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits VP9 protein domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF09625VP9 protein (VP9)VP9 proteinVP9 is a protein containing a ferredoxin fold. Two dimers come together to form one asymmetric unit which possesses a DNA recognition fold and specific metal binding sites possibly for zinc. It is postulated that being a non-structural protein VP9 is ...VP9 is a protein containing a ferredoxin fold. Two dimers come together to form one asymmetric unit which possesses a DNA recognition fold and specific metal binding sites possibly for zinc. It is postulated that being a non-structural protein VP9 is involved in the transcriptional regulation of the White spot syndrome virus, WSSV, from which it comes. WSSV is the major viral pathogen in shrimp aquaculture [1]. VP9 is found N-terminal to the Pfam:PF07056 domain.
Domain

InterPro: Protein Family Classification InterPro Database Homepage