Annotations: 2FZ0

Identification of yeast R-SNARE Nyv1p as a novel longin domain protein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Nyv1 N-terminal domain-like	8044832	4004164	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	SNARE-like	8053358	3001113	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ATP-gua_PtransN	e2fz0A1	A: beta barrels	X: STAT-like	H: CorA soluble domain-like	T: CorA soluble domain-like	F: ATP-gua_PtransN	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.450.230	Alpha Beta	2-Layer Sandwich	Beta-Lactamase	Vacuolar R-SNARE Nyv1, longin domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF09426	Vacuolar R-SNARE Nyv1, longin domain (Nyv1_longin)	Vacuolar R-SNARE Nyv1, longin domain	This domain corresponds to the N terminal longin domain of vacuolar R-SNARE Nyv1 which contains YXXomega-like sorting motif (Y31GTI34), responsible for the AP3-dependent vacuolar localization of Nyv1 [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	v-SNARE component of the vacuolar SNARE complex involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in the vacuolar membrane; Nyv1p	fusogenic activity SNAP receptor activity protein-macromolecule adaptor activity molecular adaptor activity	cellular localization establishment of protein localization transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport inorganic ion homeostasis intracellular calcium ion homeostasis cellular localization establishment of protein localization transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport inorganic ion homeostasis intracellular calcium ion homeostasis homeostatic process calcium ion homeostasis cellular homeostasis chemical homeostasis vacuolar calcium ion homeostasis intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis vesicle fusion to plasma membrane membrane organization secretion membrane fusion organelle membrane fusion export from cell vesicle-mediated transport vesicle organization cellular component organization organelle fusion organelle organization secretion by cell exocytosis exocytic process cellular component organization or biogenesis vesicle fusion vacuole fusion vacuole organization vacuole fusion, non-autophagic	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane SNARE complex protein-containing complex membrane protein complex cell periphery plasma membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR038426	Vacuolar R-SNARE Nyv1, longin domain superfamily	Homologous Superfamily
A	IPR019005	Vacuolar R-SNARE Nyv1, longin domain	Domain
A	IPR001388	Synaptobrevin-like	Family
A	IPR042855	v-SNARE, coiled-coil homology domain	Domain
A	IPR016444	Synaptobrevin/Vesicle-associated membrane protein	Family

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