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 2FYW | pdb_00002fyw

Crystal Structure of a Conserved Protein of Unknown Function from Streptococcus pneumoniae

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Cd2fywc2 Alpha and beta proteins (a/b) NIF3 (NGG1p interacting factor 3)-like NIF3 (NGG1p interacting factor 3)-like NIF3 (NGG1p interacting factor 3)-like Hypothetical protein SP1609 (Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ], SCOPe (2.08)
Cd2fywc3 Artifacts Tags Tags Tags N-terminal Tags (Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ], SCOPe (2.08)
Bd2fywb2 Alpha and beta proteins (a/b) NIF3 (NGG1p interacting factor 3)-like NIF3 (NGG1p interacting factor 3)-like NIF3 (NGG1p interacting factor 3)-like Hypothetical protein SP1609 (Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ], SCOPe (2.08)
Bd2fywb3 Artifacts Tags Tags Tags N-terminal Tags (Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ], SCOPe (2.08)
Ad2fywa1 Alpha and beta proteins (a/b) NIF3 (NGG1p interacting factor 3)-like NIF3 (NGG1p interacting factor 3)-like NIF3 (NGG1p interacting factor 3)-like Hypothetical protein SP1609 (Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ], SCOPe (2.08)
Ad2fywa2 Artifacts Tags Tags Tags N-terminal Tags (Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyNIF3-like 8041514 3001101 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNIF3-like 8041514 3001101 SCOP2B (2022-06-29)
ASCOP2 FamilyNIF3-like 8029135 4001220 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNIF3-like 8041514 3001101 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CIndigoidine_Ae2fywC1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Class I glutamine amidotransferase-likeF: Indigoidine_AECOD (v295.2)
BIndigoidine_Ae2fywB1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Class I glutamine amidotransferase-likeF: Indigoidine_AECOD (v295.2)
Afn3e2fywA1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Class I glutamine amidotransferase-likeF: fn3ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.40.1390.30 Alpha Beta 3-Layer(aba) Sandwich Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase Chain: A, domain 1CATH (4.3.0)
B3.40.1390.30 Alpha Beta 3-Layer(aba) Sandwich Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase Chain: A, domain 1CATH (4.3.0)
A3.40.1390.30 Alpha Beta 3-Layer(aba) Sandwich Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase Chain: A, domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF01784Duf34/NIF3 (NGG1p interacting factor 3) (DUF34_NIF3)Duf34/NIF3 (NGG1p interacting factor 3)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
conserved hypothetical protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR002678DUF34/NIF3Family
A, B, C
IPR036069DUF34/NIF3 superfamilyHomologous Superfamily