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 2FL1 | pdb_00002fl1

Crystal structure of red fluorescent protein from Zoanthus, zRFP574, at 2.4A resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd2fl1d_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches (Zoanthus sp. ) [TaxId: 105402 ], SCOPe (2.08)
Cd2fl1c_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches (Zoanthus sp. ) [TaxId: 105402 ], SCOPe (2.08)
Bd2fl1b_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches (Zoanthus sp. ) [TaxId: 105402 ], SCOPe (2.08)
Ad2fl1a_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches (Zoanthus sp. ) [TaxId: 105402 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyGFP-like 8081055 3000576 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGFP-like 8081055 3000576 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGFP-like 8081055 3000576 SCOP2B (2022-06-29)
ASCOP2 FamilyFluorescent proteins 8081054 4001049 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyGFP-like 8081055 3000576 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DACR_trane2fl1D1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
CACR_trane2fl1C1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
BACR_trane2fl1B1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)
AACR_trane2fl1A1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: ACR_tranECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
C2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
B2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
A2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Red fluorescent protein zoanRFP- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR011584Green fluorescent protein-relatedFamily
A, B, C, D
IPR009017Green fluorescent proteinHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C, D
XYG Parent Component: ASP, TYR, GLY

:  AA0410

:  2-imino-alanine 5-imidazolinone glycine MOD:00820