2FJI
Crystal structure of the C-terminal domain of the exocyst subunit Sec6p
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth 1] | SCOP2 Family | Sec6-like | 8047705 | 4005770 | SCOP2 (2022-06-29) |
A [auth 1] | SCOP2 Superfamily | Cullin repeat-like | 8052698 | 3000059 | SCOP2 (2022-06-29) |
B [auth 2] | SCOP2B Superfamily | Cullin repeat-like | 8052698 | 3000059 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth 1] | Sec6 | e2fji11 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: Sec6 | ECOD (1.6) |
B [auth 2] | Sec6 | e2fji21 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: Sec6 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth 1] | 1.10.357.50 | Mainly Alpha | Orthogonal Bundle | Tetracycline Repressor | domain 2 | CATH (4.3.0) |
A [auth 1] | 1.10.357.70 | Mainly Alpha | Orthogonal Bundle | Tetracycline Repressor | domain 2 | CATH (4.3.0) |
B [auth 2] | 1.10.357.50 | Mainly Alpha | Orthogonal Bundle | Tetracycline Repressor | domain 2 | CATH (4.3.0) |
B [auth 2] | 1.10.357.70 | Mainly Alpha | Orthogonal Bundle | Tetracycline Repressor | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth 1], B [auth 2] | PF06046 | Exocyst complex component Sec6 (Sec6) | Exocyst complex component Sec6 | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth 1], B [auth 2] | IPR010326 | Exocyst complex component EXOC3/Sec6 | Family |
A [auth 1], B [auth 2] | IPR042532 | Exocyst complex component EXOC3/Sec6, C-terminal domain | Homologous Superfamily |