Annotations: 2FIP

Phage phi29 transcription regulator p4

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Phage phi29 transcription regulator p4	8047248	4005527	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Phage phi29 transcription regulator p4	8103605	3002787	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	MarR	e2fipA1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (v294.1)
B	MarR	e2fipB1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (v294.1)
C	MarR	e2fipC1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (v294.1)
E	MarR	e2fipE1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (v294.1)
F	RraA-like	e2fipF1	A: a/b three-layered sandwiches	X: Tautomerase/MIF-like	H: Tautomerase/MIF	T: Tautomerase/MIF	F: RraA-like	ECOD (v294.1)
D	MarR	e2fipD1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)
B	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)
C	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)
E	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)
F	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)
D	3.30.70.3560	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Phi-29-like late genes activator, P4	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF05464	Phi-29-like late genes activator (early protein GP4) (Phi-29_GP4)	Phi-29-like late genes activator (early protein GP4)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Late genes activator	DNA binding binding nucleic acid binding DNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups transcription regulator activity DNA-binding transcription factor activity DNA binding binding nucleic acid binding DNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups transcription regulator activity DNA-binding transcription factor activity sigma factor activity	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR038246	Phi-29-like late genes activator superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR008771	Phi-29-like late genes activator	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.