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Fibrinogen Fragment D with "A" knob peptide mimic GPRVVE


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BChloroa_b-binde2ffdB1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)
EChloroa_b-binde2ffdE1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)
CChloroa_b-binde2ffdC1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)
FChloroa_b-binde2ffdF1 A: alpha arraysX: Profilin-likeH: a+b domain in beta-lactamase/transpeptidase-like proteinsT: a+b domain in beta-lactamase/transpeptidase-like proteinsF: Chloroa_b-bindECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
D1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
B1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
B3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
B4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
E1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
E3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
E4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
C1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
C3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
C4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)
F1.20.5.50 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
F3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen Chain A, domain 1CATH (4.3.0)
F4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, D
PF08702Fibrinogen alpha/beta chain family (Fib_alpha)Fibrinogen alpha/beta chain family- Coiled-coil
B, E
PF00147Fibrinogen beta and gamma chains, C-terminal globular domain (Fibrinogen_C)Fibrinogen beta and gamma chains, C-terminal globular domainDomain
C, F
PF00147Fibrinogen beta and gamma chains, C-terminal globular domain (Fibrinogen_C)Fibrinogen beta and gamma chains, C-terminal globular domainDomain
C, F
PF08702Fibrinogen alpha/beta chain family (Fib_alpha)Fibrinogen alpha/beta chain family- Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, D
Fibrinogen alpha/alpha-E Chain
B, E
Fibrinogen beta chain
C, F
Fibrinogen gamma chain
G, H, I, J
GLY-PRO-ARG-VAL-VAL-GLU peptide---

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, D
:  P02671
B, E
:  P02675
C, F
:  P02679