2FDB
Crystal Structure of Fibroblast growth factor (FGF)8b in complex with FGF Receptor (FGFR) 2c
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth M] | d2fdbm1 | All beta proteins | beta-Trefoil | Cytokine | Fibroblast growth factors (FGF) | Fibroblast growth factor 8, FGF8 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth N] | d2fdbn_ | All beta proteins | beta-Trefoil | Cytokine | Fibroblast growth factors (FGF) | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B [auth P] | d2fdbp1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | I set domains | Fibroblast growth factor receptor, FGFR | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D [auth R] | d2fdbr1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | I set domains | Fibroblast growth factor receptor, FGFR | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth M] | SCOP2 Family | Fibroblast growth factors (FGF) | 8020496 | 4001987 | SCOP2 (2022-06-29) |
A [auth M] | SCOP2 Superfamily | Cytokine | 8032876 | 3000648 | SCOP2 (2022-06-29) |
C [auth N] | SCOP2B Superfamily | Cytokine | 8032876 | 3000648 | SCOP2B (2022-06-29) |
B [auth P] | SCOP2 Family | I set domains | 8054780 | 4007543 | SCOP2 (2022-06-29) |
B [auth P] | SCOP2 Family | I set domains | 8055563 | 4007543 | SCOP2 (2022-06-29) |
B [auth P] | SCOP2 Superfamily | Immunoglobulin (Ig) domain-like | 8054781 | 3000071 | SCOP2 (2022-06-29) |
B [auth P] | SCOP2 Superfamily | Immunoglobulin (Ig) domain-like | 8055564 | 3000071 | SCOP2 (2022-06-29) |
D [auth R] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8055564 | 3000071 | SCOP2B (2022-06-29) |
D [auth R] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054781 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth M] | FGF | e2fdbM1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: FGF | ECOD (1.6) |
C [auth N] | FGF | e2fdbN1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: FGF | ECOD (1.6) |
B [auth P] | I-set | e2fdbP2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: I-set | ECOD (1.6) |
D [auth R] | I-set | e2fdbR2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: I-set | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth M] | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
C [auth N] | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
B [auth P] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D [auth R] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth M], C [auth N] | PF00167 | Fibroblast growth factor (FGF) | Fibroblast growth factor | Fibroblast growth factors are a family of proteins involved in growth and differentiation in a wide range of contexts. They are found in a wide range of organisms, from nematodes to humans [2]. Most share an internal core region of high similarity, c ... | Domain |
B [auth P], D [auth R] | PF13927 | Immunoglobulin domain (Ig_3) | Immunoglobulin domain | This family contains immunoglobulin-like domains. | Domain |
B [auth P], D [auth R] | PF07679 | Immunoglobulin I-set domain (I-set) | Immunoglobulin I-set domain | - | Domain |