Annotations: 2F9C

Crystal structure of YDCK from Salmonella cholerae. NESG target SCR6

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2f9cb1	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	YdcK-like	automated matches	(Salmonella enterica ) [TaxId: 28901 ],	SCOPe (2.08)
B	d2f9cb2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Salmonella enterica ) [TaxId: 28901 ],	SCOPe (2.08)
A	d2f9ca1	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	YdcK-like	Hypothetical protein YdcK	(Salmonella enterica ) [TaxId: 28901 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8040693	3001804	SCOP2B (2022-06-29)
A	SCOP2 Family	YdcK-like	8028314	4002093	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Trimeric LpxA-like enzymes	8040693	3001804	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	MATH_2	e2f9cB1	A: beta barrels	X: HTH	H: Nudix	T: winged helix domain	F: MATH_2	ECOD (v294.2)
A	B_solenoid_ydck	e2f9cA1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes	T: Trimeric LpxA-like enzymes	F: B_solenoid_ydck	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Hypothetical protein YDCK	transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups acyltransferase activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR050065	Bifunctional protein GlmU-like	Family
A, B	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
A, B	IPR048014	YdcK-like	Family
A, B	IPR040831	YdcK Beta solenoid repeat	Repeat

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