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 2ETD | pdb_00002etd

Crystal structure of a lema protein (tm0961) from thermotoga maritima msb8 at 2.28 A resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2etda1 All alpha proteins Bromodomain-like LemA-like LemA-like Hypothetical protein TM0961 (Thermotoga maritima MSB8 ) [TaxId: 243274 ], SCOPe (2.08)
Ad2etda2 Artifacts Tags Tags Tags N-terminal Tags (Thermotoga maritima MSB8 ) [TaxId: 243274 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyLemA-like 8027776 4001249 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyLemA-like 8040155 3001153 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALemAe2etdA1 A: alpha bundlesX: Bromodomain-likeH: LemA-likeT: LemA-likeF: LemAECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.1440.20 Mainly Alpha Up-down Bundle de novo design (two linked rop proteins) LemA-like domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF04011LemA family (LemA)LemA family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
lemA protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR023353LemA-like domain superfamilyHomologous Superfamily
IPR007156MamQ/LemAFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
MLY Parent Component: LYS

:  AA0075

:  N6,N6-dimethyl-L-lysine MOD:00084
MSE Parent Component: MET

:  AA0075